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Gene Expression Data
Assay Details
Assay
Reference: J:138785 Passante L, et al., Temporal regulation of ephrin/Eph signalling is required for the spatial patterning of the mammalian striatum. Development. 2008 Oct;135(19):3281-90
Assay type: RNA in situ
MGI Accession ID: MGI:6766441
Gene symbol: Epha4
Gene name: Eph receptor A4
Probe: Sek cDNA2
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 2A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain ventricular layer Weak 2A
TS20: corpus striatum Absent 2A
Specimen 2D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: forebrain ventricular layer Present 2D
TS22: corpus striatum Present Regionally restricted 2D
Specimen 2G: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: corpus striatum Present Diffuse 2G
Specimen 2J: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: corpus striatum Present Regionally restricted 2J There is a matrix-like pattern of expression with small and evenly distributed patches devoid of staining.
Specimen 2M: postnatal day 2 (more )
Structure Level Pattern Image Note
TS27: corpus striatum Present Regionally restricted 2M There is a matrix-like pattern of expression with small and evenly distributed patches devoid of staining.
Specimen 3A: postnatal day 2 (more )
Note: Double labeled: green - Epha4; red - Ppp1r1b (assay MGI:6766446).
Structure Level Pattern Image Note
TS27: corpus striatum Present Regionally restricted 3C , 3A There is a matrix-like pattern of expression with small and evenly distributed patches devoid of staining that was found to complement the Ppp1r1b-positive striosomes.
Specimen 3D: postnatal day 2 (more )
Note: Double labeled: green - Epha4; red - Efna5 (assay MGI:6766442).
Structure Level Pattern Image Note
TS27: corpus striatum Present Regionally restricted 3F , 3D There is a matrix-like pattern of expression with small and evenly distributed patches devoid of staining. At the periphery there was partial coexpression, and at the central-most region there was a complementary expression pattern.
Specimen 3G: postnatal day 4 (more )
Note: Double labeled: green - Epha4; red - Ppp1r1b (assay MGI:6766446).
Structure Level Pattern Image Note
TS27: corpus striatum Present Regionally restricted 3I , 3G There is a matrix-like pattern of expression with small and evenly distributed patches devoid of staining that was found to complement the Ppp1r1b-positive striosomes.
Specimen 3J: postnatal day 4 (more )
Note: Double labeled: green - Epha4; red - Efna5 (assay MGI:6766442).
Structure Level Pattern Image Note
TS27: corpus striatum Present Regionally restricted 3L , 3J There is a matrix-like pattern of expression with small and evenly distributed patches devoid of staining. At the periphery there was partial coexpression, and at the central-most region there was a complementary expression pattern.
Specimen not shown: postnatal day 0 (more )
Note: Also stained for Ppp1r1b (assay MGI:6766446).
Structure Level Pattern Image Note
TS27: corpus striatum Present Regionally restricted There is a matrix-like pattern of expression with small and evenly distributed patches devoid of staining that was found not quite to complement the Ppp1r1b-positive striosomes.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
MGI 6.23 		The Jackson Laboratory