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Gene Expression Data
Assay Details
Assay
Reference: J:251975 Vibulyaseck S, et al., Spatial rearrangement of Purkinje cell subsets forms the transverse and longitudinal compartmentalization in the mouse embryonic cerebellum. J Comp Neurol. 2017 Oct 1;525(14):2971-2990
Assay type: Immunohistochemistry
MGI Accession ID: MGI:6506227
Gene symbol: Rora
Gene name: RAR-related orphan receptor alpha
Antibody: anti-RORalpha (H-19) sc-28612
Detection system: Secondary antibody coupled to Texas Red
Results
Specimen 2b: embryonic day 14.5 (more )
Note: Double labeled: magenta - Rora; green - Foxp2 (assay MGI:6506202).
Structure Level Pattern Image Note
TS22: cerebellum layer Present Regionally restricted 2b1 , 2b2 Expression is in the nucleus of Purkinje cells excluding the external granular layer.

Specimen 4a first: embryonic day 14.5 (more )
Note: Double labeled: magenta - Rora; green - Foxp2 (assay MGI:6506202).
Structure Level Pattern Image Note
TS22: cerebellum Present Regionally restricted 4a first Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.
TS22: cerebellum layer Present Regionally restricted 4a first Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.

Specimen 4a second: embryonic day 14.5 (more )
Note: Double labeled: magenta - Rora; green - Foxp2 (assay MGI:6506202).
Structure Level Pattern Image Note
TS22: cerebellum Present Regionally restricted 4a second Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.
TS22: cerebellum layer Present Regionally restricted 4a second Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.

Specimen 4a third: embryonic day 14.5 (more )
Note: Double labeled: magenta - Rora; green - Foxp2 (assay MGI:6506202).
Structure Level Pattern Image Note
TS22: cerebellum Present Regionally restricted 4a third Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.
TS22: cerebellum layer Present Regionally restricted 4a third Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.

Specimen 4a fourth: embryonic day 14.5 (more )
Note: Double labeled: magenta - Rora; green - Foxp2 (assay MGI:6506202).
Structure Level Pattern Image Note
TS22: cerebellum Present Regionally restricted 4a fourth Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.
TS22: cerebellum layer Present Regionally restricted 4a fourth Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.

Specimen 4e first: embryonic day 14.5 (more )
Note: Double labeled: magenta - Rora; green - Foxp2 (assay MGI:6506202).
Structure Level Pattern Image Note
TS22: cerebellum Present Regionally restricted 4e first Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.
TS22: cerebellum layer Present Regionally restricted 4e first Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.

Specimen 4e second: embryonic day 14.5 (more )
Note: Double labeled: magenta - Rora; green - Foxp2 (assay MGI:6506202).
Structure Level Pattern Image Note
TS22: cerebellum Present Regionally restricted 4e second Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.
TS22: cerebellum layer Present Regionally restricted 4e second Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.

Specimen 4e third: embryonic day 14.5 (more )
Note: Double labeled: magenta - Rora; green - Foxp2 (assay MGI:6506202).
Structure Level Pattern Image Note
TS22: cerebellum Present Regionally restricted 4e third Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.
TS22: cerebellum layer Present Regionally restricted 4e third Expression is at varying intenisties in the medial-, central-, dorsal-, mid-lateral-, lateral-, dorsolateral-, rostrodorso-lateral-, and in the ventrolateral groups of Purkinje cell subsets.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory