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Gene Expression Data
Assay Details
Assay
Reference: J:248983 Varadarajan SG, et al., Netrin1 establishes multiple boundaries for axon growth in the developing spinal cord. Dev Biol. 2017 Oct 1;430(1):177-187
Assay type: Immunohistochemistry
MGI Accession ID: MGI:6446809
Gene symbol: Sox2
Gene name: SRY (sex determining region Y)-box 2
Results
Specimen 1A: embryonic day 10.5 (more )
Note: Triple labeled: blue - Sox2; red - Cntn2 (assay MGI:6446808); green - neurofilament.
Structure Level Pattern Image Note
TS17: future spinal cord Present Regionally restricted 1A [thoracic] Expression in ventricular zone.
Specimen 1B: embryonic day 10.5 (more )
Note: Triple labeled: blue - Sox2; red - Cntn2 (assay MGI:6446808); green - neurofilament.
Structure Level Pattern Image Note
TS17: neural tube lateral wall Present Regionally restricted 1B , 1B (center) Expression in ventricular zone.
Specimen 1D: embryonic day 10.5 (more )
Note: Triple labeled: blue - Sox2; red - Robo3 (assay MGI:6446810); green - neurofilament.
Structure Level Pattern Image Note
TS17: future spinal cord Present Regionally restricted 1D Expression in ventricular zone.
Specimen 1E: embryonic day 10.5 (more )
Note: Triple labeled: blue - Sox2; red - Robo3 (assay MGI:6446810); green - neurofilament.
Structure Level Pattern Image Note
TS17: neural tube lateral wall Present Regionally restricted 1E (center) , 1E Expression in ventricular zone.
Specimen 1F: embryonic day 11.5 (more )
Note: Triple labeled: blue - Sox2; red - Cntn2 (assay MGI:6446808); green - neurofilament.
Structure Level Pattern Image Note
TS19: neural tube ventricular layer Present 1F
Specimen 1G: embryonic day 11.5 (more )
Note: Triple labeled: blue - Sox2; red - Cntn2 (assay MGI:6446808); green - neurofilament.
Structure Level Pattern Image Note
TS19: neural tube ventricular layer Present 1G (center) , 1G
Specimen 1I: embryonic day 11.5 (more )
Note: Triple labeled: blue - Sox2; red - Robo3 (assay MGI:6446810); green - neurofilament.
Structure Level Pattern Image Note
TS19: neural tube ventricular layer Present 1I
Specimen 1J: embryonic day 11.5 (more )
Note: Triple labeled: blue - Sox2; red - Robo3 (assay MGI:6446810); green - neurofilament.
Structure Level Pattern Image Note
TS19: neural tube ventricular layer Present 1J , 1J (center)
Specimen 1K: embryonic day 12.5 (more )
Note: Triple labeled: blue - Sox2; red - Cntn2 (assay MGI:6446808); green - neurofilament.
Structure Level Pattern Image Note
TS20: spinal cord ventricular layer Present 1K
Specimen 1L: embryonic day 12.5 (more )
Note: Triple labeled: blue - Sox2; red - Cntn2 (assay MGI:6446808); green - neurofilament.
Structure Level Pattern Image Note
TS20: spinal cord ventricular layer Present 1L (center) , 1L
Specimen 1N: embryonic day 12.5 (more )
Note: Triple labeled: blue - Sox2; red - Robo3 (assay MGI:6446810); green - neurofilament.
Structure Level Pattern Image Note
TS20: spinal cord ventricular layer Present 1N
Specimen 1O: embryonic day 12.5 (more )
Note: Triple labeled: blue - Sox2; red - Robo3 (assay MGI:6446810); green - neurofilament.
Structure Level Pattern Image Note
TS20: spinal cord ventricular layer Present 1O , 1O (center)
Specimen 4C: embryonic day 12.5; Ntn1Gt(ST629)Byg/Ntn1+ (more )
Note: Triple labeled: blue - Sox2; red - Ntn1 reporter (assay MGI:6446838); green - neurofilament.
Structure Level Pattern Image Note
TS20: spinal cord Present 4C
Specimen 4D: embryonic day 12.5; Ntn1Gt(ST629)Byg/Ntn1+ (more )
Note: Triple labeled: blue - Sox2; red - Ntn1 reporter (assay MGI:6446838); green - neurofilament.
Structure Level Pattern Image Note
TS20: spinal cord Present 4D
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory