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Gene Expression Data
Assay Details
Assay
Reference: J:89166 Oosterveen T, et al., Expression of retinaldehyde dehydrogenase II and sequential activation of 5' Hoxb genes in the mouse caudal hindbrain. Gene Expr Patterns. 2004 May;4(3):243-7
Assay type: RNA in situ
MGI Accession ID: MGI:5905593
Gene symbol: Hoxb5
Gene name: homeobox B5
Probe: Hoxb5 probe7
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Regionally restricted 1A Anterior expression boundary caudal to otic vesicle. Distance between the rostral most expressing neural tissue and the otic vesicle is indicated in the image.

Specimen 1B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube Present Regionally restricted 1B Authors report the rostral boundary of expression domain is more diffuse at E10.5 than at E11.5.

Specimen 1C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube Present Regionally restricted 1C Authors state the that the distance between otic vesicle and the most anterior expressing cells is reduced 2-fold between E9.5 and E11.5.

Specimen 2A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Regionally restricted 2A Expression up to level of somite 4 in the neural tube.

Specimen 2C: embryonic day 9.5 (more )
Note: Double labeled: blue - Hoxb5; orange - Raldh2 (Aldh1a2 assay MGI:5905599).
Structure Level Pattern Image Note
TS15: neural tube Present Regionally restricted 2C Expression up to level of somite 4 in the neural tube.

Specimen 2F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube Present Regionally restricted 2F Rostral boundary of expression located more rostrally than anterior expression limit of Raldh2 (Aldh1a2).

Specimen 2H: embryonic day 10.5 (more )
Note: Double labeled: blue - Hoxb5; orange - Raldh2 (Aldh1a2 assay MGI:5905599).
Structure Level Pattern Image Note
TS17: neural tube Present Regionally restricted 2H Rostral boundary of expression located more rostrally than anterior expression limit of Raldh2 (Aldh1a2).
TS17: spinal ganglion Present 2H


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory