Gene Expression Data
Assay Details
Assay
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Reference:
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J:182578
Kay JN, et al., MEGF10 and MEGF11 mediate homotypic interactions required for mosaic spacing of retinal neurons. Nature. 2012 Mar 22;483(7390):465-9
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Assay type:
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Immunohistochemistry
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MGI Accession ID:
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MGI:5660818
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Gene symbol:
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Chat
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Gene name:
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choline acetyltransferase
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Results
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Specimen
1f bottom:
postnatal day 3
(more )
Note: Double labeled: red - Chat; green - Megf10 (assay MGI:5660817).
Specimen
1f bottom:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 3
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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Note:
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Double labeled: red - Chat; green - Megf10 (assay MGI:5660817).
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Specimen
2a wild type:
postnatal day 15
(more )
Specimen
2a wild type:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 15
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Sex:
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Not Specified
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Type:
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whole mount
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Structure |
Level |
Pattern |
Image |
Note |
TS28: retina inner nuclear layer |
Present |
Regionally restricted |
2a left
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Expression was detected in starburst amacrine cells, which were evenly spaced.
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Specimen
2a Megf10-/-:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina inner nuclear layer |
Present |
Regionally restricted |
2a middle
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Expression was detected in starburst amacrine cells, which exhibited clumps and gaps in their spacing.
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Specimen
2b wild type:
postnatal day 15
(more )
Specimen
2b wild type:
(close )
Genetic Background:
|
Not Specified
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Age:
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postnatal day 15
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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Specimen
2b Megf10-/-:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina ganglion cell layer |
Present |
Regionally restricted |
2b bottom
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Expression was detected in the starburst amacrine cells that had migrated to the appropriate cell layers as in wild type. There were regions where the somata were clumped in the mutant.
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TS28: retina inner nuclear layer |
Present |
Regionally restricted |
2b bottom
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Expression was detected in the starburst amacrine cells that had migrated to the appropriate cell layers as in wild type. There were regions where the somata were clumped in the mutant.
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TS28: retina inner plexiform layer |
Present |
Regionally restricted |
2b bottom
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Expression was detected in the dendrites as in wild type.
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Specimen
S1d +/+:
postnatal day 3
(more )
Note: Double labeled: red - Chat; green - Megf10 (assay MGI:5660817).
Specimen
S1d +/+:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 3
|
Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
|
Note:
|
Double labeled: red - Chat; green - Megf10 (assay MGI:5660817).
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: retina ganglion cell layer |
Present |
Regionally restricted |
S1d +/+ right
,
S1d +/+ left
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Expression was detected in starburst amacrine cells.
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TS27: retina inner nuclear layer |
Present |
Regionally restricted |
S1d +/+ right
,
S1d +/+ left
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Expression was detected in starburst amacrine cells.
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Specimen
S1d -/-:
(close )
Genetic Background:
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involves: 129S4/SvJae * C57BL/6
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Mutant Allele(s):
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Megf10tm1a(KOMP)Jrs/Megf10tm1a(KOMP)Jrs
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Age:
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postnatal day 3
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
|
Note:
|
Double labeled: red - Chat; green - Megf10 (assay MGI:5660817).
|
Structure |
Level |
Pattern |
Image |
Note |
TS27: retina ganglion cell layer |
Present |
Regionally restricted |
S1d -/- left
,
S1d -/- right
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Expression was detected in starburst amacrine cells as in wild type.
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TS27: retina inner nuclear layer |
Present |
Regionally restricted |
S1d -/- left
,
S1d -/- right
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Expression was detected in starburst amacrine cells as in wild type.
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Specimen
S3d wild type:
postnatal day 15-17
(more )
Specimen
S3d wild type:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 15-17
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Sex:
|
Not Specified
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Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina ganglion cell layer |
Present |
Regionally restricted |
S3d left
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Expression was detected in the starburst amacrine cells.
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Specimen
S3d -/-:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina ganglion cell layer |
Present |
Regionally restricted |
S3d right
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Expression was detected in the starburst amacrine cells as in wild type, but there were defects in spacing similar to those in the inner nuclear layer.
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Specimen
S3e wild type:
postnatal day 15-17
(more )
Specimen
S3e wild type:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 15-17
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Sex:
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Not Specified
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Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina inner plexiform layer |
Present |
Regionally restricted |
S3e left
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Expression was detected in the starburst amacrine cell processes, which form a meshwork with small holes of relatively constant size. The processes form a dense plexus in two inner plexiform sublaminae.
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Specimen
S3e -/-:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina inner plexiform layer |
Present |
Regionally restricted |
S3e right
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Expression was detected in the starburst amacrine cell processes, but the spacing in the mutant plexus shows larger holes of variable sizes and abnormal aggregations corresponding to the defects in the soma array.
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Specimen
S4a wild type:
postnatal day 15
(more )
Specimen
S4a wild type:
(close )
Genetic Background:
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Not Specified
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Age:
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postnatal day 15
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Sex:
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Not Specified
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Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina layer |
Present |
Regionally restricted |
S4a left
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Expression was detected in starburst amacrine cells.
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Specimen
S4a +/-:
(close )
Genetic Background:
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involves: 129S4/SvJae * C57BL/6
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Mutant Allele(s):
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Megf10tm1a(KOMP)Jrs/Megf10+
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Age:
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postnatal day 15
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Sex:
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Not Specified
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Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina layer |
Present |
Regionally restricted |
S4a right
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Expression was detected in starburst amacrine cells. The heterozygous mosaic regularity was mildly disorganized.
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Specimen
S6a right:
(close )
Genetic Background:
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involves: 129S4/SvJae * C57BL/6
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Mutant Allele(s):
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Megf10tm1a(KOMP)Jrs/Megf10+
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Age:
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postnatal day 14
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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Note:
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Double labeled: red - Chat; green - Megf10 (assay MGI:5660930).
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Specimen
S6b right:
(close )
Genetic Background:
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involves: C57BL/6N
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Mutant Allele(s):
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Megf11tm1a(EUCOMM)Wtsi/Megf11+
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Age:
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postnatal day 14
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
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Note:
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Double labeled: red - Chat; green - Megf11 (assay MGI:5660932).
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Specimen
S6d right:
(close )
Genetic Background:
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involves: 129S4/SvJae * C57BL/6
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Mutant Allele(s):
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Megf10tm1a(KOMP)Jrs/Megf10tm1a(KOMP)Jrs
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Age:
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postnatal day 14
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Cryosection
|
Note:
|
Double labeled: red - Chat; green - Megf10 (assay MGI:5660930).
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Specimen
S6e right:
(close )
Specimen
S8a:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina inner nuclear layer |
Present |
Regionally restricted |
S8a
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Expression was detected in starburst amacrine cells as in wild type.
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Specimen
S8b:
(close )
Structure |
Level |
Pattern |
Image |
Note |
TS28: retina inner nuclear layer |
Present |
Regionally restricted |
S8b
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Expression was detected in starburst amacrine cells. The abnormal mosaic spacing was no different than Megf10-/- mutants.
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