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Gene Expression Data
Assay Details
Assay
Reference: J:203065 Sugiyama T, et al., The germinal matrices in the developing dentate gyrus are composed of neuronal progenitors at distinct differentiation stages. Dev Dyn. 2013 Dec;242(12):1442-53
Assay type: Immunohistochemistry
MGI Accession ID: MGI:5587817
Gene symbol: Neurod1
Gene name: neurogenic differentiation 1
Antibody: anti-Neurod1 (N-19; sc-1084)
Detection system: Secondary antibody coupled to Cy3
Results
Specimen 5C: embryonic day 14.5 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS22: telencephalon Present Regionally restricted 5C Expression is in the secondary germinal matrix of the forming dentate gyrus.
Specimen 5D: embryonic day 14.5 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS22: telencephalon Present Regionally restricted 5D Expression is in the secondary germinal matrix of the forming dentate gyrus.
Specimen 5G: embryonic day 16.5 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS24: telencephalon Present Regionally restricted 5G Expression is in the secondary germinal matrix of the forming dentate gyrus.
Specimen 5H: embryonic day 16.5 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS24: telencephalon Present Regionally restricted 5H Expression is in the secondary germinal matrix of the forming dentate gyrus.
Specimen 5K: embryonic day 16.5 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS24: telencephalon Present Regionally restricted 5K Expression is in the tertiary germinal matrix of the forming dentate gyrus.
Specimen 5L: embryonic day 16.5 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS24: telencephalon Present Regionally restricted 5L Expression is in the tertiary germinal matrix of the forming dentate gyrus.
Specimen 5O: embryonic day 18.5 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS26: dentate gyrus Present Regionally restricted 5O Expression is in the secondary germinal matrix.
Specimen 5P: embryonic day 18.5 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS26: dentate gyrus Present Regionally restricted 5P Expression is in the secondary germinal matrix.
Specimen 5S: embryonic day 18.5 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS26: dentate gyrus Strong Regionally restricted 5S , 5W Expression is in the tertiary germinal matrix.
Specimen 5T: embryonic day 18.5 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS26: dentate gyrus Strong Regionally restricted 5T , 5X Expression is in the tertiary germinal matrix.
Specimen 6B: postnatal day 5 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present 6d right , 6c right , 6B , 6d left , 6c left
Specimen 6C: postnatal day 5 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present 6f left , 6C , 6f right , 6e right , 6e left
Specimen 6E: postnatal day 10 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present 6E , 6h left , 6h right
Specimen 6F: postnatal day 10 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present 6i right , 6F , 6i left
Specimen 6H: postnatal day 20 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present 6H , 6k left , 6k right
Specimen 6I: postnatal day 20 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present 6l left , 6I , 6l right
Specimen 7B: postnatal day 5 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus Present Regionally restricted 7B Expression is in the lateral end of the lower blade of the dentate gyrus.
Specimen 7C: postnatal day 5 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS28: dentate gyrus Present Regionally restricted 7C Expression is in the lateral end of the lower blade of the dentate gyrus.
Specimen 7E: postnatal day 10 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus Present Regionally restricted 7E Expression is in the lateral end of the lower blade of the dentate gyrus.
Specimen 7F: postnatal day 10 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS28: dentate gyrus Present Regionally restricted 7F Expression is in the lateral end of the lower blade of the dentate gyrus.
Specimen 7H: postnatal day 20 (more )
Note: Double labeled: red - Neurod1; green - Pax6 (assay MGI:5587811).
Structure Level Pattern Image Note
TS28: dentate gyrus subgranular zone Present 7H
Specimen 7I: postnatal day 20 (more )
Note: Double labeled: red - Neurod1; green - Eomes (assay MGI:5587814).
Structure Level Pattern Image Note
TS28: dentate gyrus subgranular zone Present 7I
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/09/2025
MGI 6.24 		The Jackson Laboratory