Gene Expression Data
Assay Details
Assay
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Reference:
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J:76815
Broccoli V, et al., Dmbx1 is a paired-box containing gene specifically expressed in the caudal most brain structures. Mech Dev. 2002 Jun;114(1-2):219
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:3039779
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Gene symbol:
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Dmbx1
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Gene name:
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diencephalon/mesencephalon homeobox 1
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Results
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Specimen
2A:
embryonic day 8.5
(more )
Specimen
2A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2C:
embryonic day 8.5
(more )
Specimen
2C:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: future brain |
Present |
Regionally restricted |
2C
|
Expression is in the anterior neural plate with the anterior border extending over part of the diencephalic anlage.
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TS13: future midbrain |
Present |
Regionally restricted |
2C
|
Expression is in the anterior neural plate with the anterior border extending over part of the diencephalic anlage.
|
TS13: future prosencephalon |
Present |
Regionally restricted |
2C
|
Expression is in the anterior neural plate with the anterior border extending over part of the diencephalic anlage.
|
Specimen
2E:
embryonic day 9.5
(more )
Specimen
2E:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 9.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2I:
embryonic day 10.5
(more )
Specimen
2I:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: hindbrain |
Strong |
Regionally restricted |
2I
|
Expression is in a bilateral stream of cells in the rhombic lip.
|
Specimen
2J, K:
embryonic day 10.5
(more )
Specimen
2J, K:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 10.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
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Fixation:
|
4% Paraformaldehyde
|
Specimen
2L:
embryonic day 12.5
(more )
Specimen
2L:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2M:
embryonic day 12.5
(more )
Specimen
2M:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: spinal cord |
Present |
|
2M
|
|
TS20: forebrain |
Present |
Regionally restricted |
2M
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Expression is maintained in the alar plate and is absent in the basal plate and extends from the caudal mesencephalon to prosomere 1.
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TS20: midbrain |
Present |
Regionally restricted |
2M
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Expression is maintained in the alar plate and is absent in the basal plate and extends from the caudal mesencephalon to prosomere 1.
|
Specimen
2N:
embryonic day 12.5
(more )
Specimen
2N:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2O:
embryonic day 14.5
(more )
Specimen
2O:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS22: cerebellum |
Present |
Regionally restricted |
2O
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Expressing cells disperse rostrally over the surface of the cerebellar anlage.
|
TS22: forebrain |
Present |
Regionally restricted |
2O
|
Expression is maintained in the alar plate and is absent in the basal plate and extends from the caudal mesencephalon to prosomere 1.
|
TS22: midbrain |
Present |
Regionally restricted |
2O
|
Expression is maintained in the alar plate and is absent in the basal plate and extends from the caudal mesencephalon to prosomere 1.
|
TS22: midbrain tegmentum |
Absent |
|
2O
|
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TS22: pons |
Absent |
|
2O
|
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Specimen
2P:
embryonic day 14.5
(more )
Specimen
2P:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 14.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
Not Shown:
embryonic day 16.5
(more )
Specimen
Not Shown:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 16.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3A:
embryonic day 11.5
(more )
Note: Also stained for Pax7 (assay MGI:3039938).
Specimen
3A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Also stained for Pax7 (assay MGI:3039938).
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: neural tube lateral wall |
Present |
Regionally restricted |
3A
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Expression is in a domain below the sulcus limitans and does not overlap with that of Pax7.
|
Specimen
3C:
embryonic day 11.5
(more )
Note: Also stained for En1 (assay MGI:3039791).
Specimen
3C:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Also stained for En1 (assay MGI:3039791).
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: neural tube lateral wall |
Present |
Regionally restricted |
3C
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Expression is in a domain below the sulcus limitans of V0 interneurons abutting En1 expressing cells.
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Specimen
3D:
embryonic day 11.5
(more )
Note: Also stained for Pax6 (assay MGI:3039932).
Specimen
3D:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 11.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Also stained for Pax6 (assay MGI:3039932).
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: neural tube lateral wall |
Present |
Regionally restricted |
3D
|
Expression is in a domain below the sulcus limitans and does not overlap with that of Pax6.
|
Specimen
3E:
embryonic day 12.5
(more )
Note: Also stained for Pax7 (assay MGI:3039938).
Specimen
3E:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Also stained for Pax7 (assay MGI:3039938).
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: spinal cord lateral wall |
Present |
Regionally restricted |
3E
|
Expression is in a domain below the sulcus limitans and does not overlap with that of Pax7.
|
Specimen
3G:
embryonic day 12.5
(more )
Note: Also stained for En1 (assay MGI:3039791).
Specimen
3G:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Also stained for En1 (assay MGI:3039791).
|
Specimen
3I:
embryonic day 12.5
(more )
Specimen
3I:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3K:
embryonic day 12.5
(more )
Specimen
3K:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 12.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: spinal cord lateral wall |
Present |
Regionally restricted |
3K
|
Expression is in a domain below the sulcus limitans in the differentiated V0 interneurons.
|
|