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Genome Analysis Tools
Genome Analysis Tools
• Batch Query
Input a list of gene IDs or symbols and retrieve other database IDs and gene attributes (e.g. phenotypes, GO).
• MouseMine
Access MGI data via InterMine.
• Multiple Genome Viewer (MGV)
Compare genome features of de novo sequenced mouse strains.
• NCBI BLAST
Search for sequence similarity using NCBI BLAST.
• JAX Synteny Browser
Explore the phenotype and functional attributes of genome features in regions of conserved synteny across mouse, human, and rat.
• VLAD - Visual Annotation Display
VLAD is a tool for visualizing GO annotations. The annotation data are a subset of those available at the GO web site. You specify an annotation data set and a set of genes, and the tool will produce a graphical summary of the annotations.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
06/24/2025
MGI 6.24 		The Jackson Laboratory