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Gene Ontology Browser
Term Detail
GO term:collagen
Synonym: other collagen
GO id:GO:0005581
Definition:Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures.
Number of paths to term: 7

is-adenotes an 'is-a' relationship
part-ofdenotes a 'part-of' relationship
regulatesdenotes a 'regulates' relationship
positively-regulatesdenotes a 'positively-regulates' relationship
negatively-regulatesdenotes a 'negatively-regulates' relationship


Gene_Ontology
        is-acellular_component
                is-aextracellular matrix
                        part-ofextracellular matrix part
                                is-aapical lamina of hyaline layer
                                is-abasal lamina +
                                is-abasement membrane +
                                is-abiofilm matrix part +
                                is-acollagen [GO:0005581] (89 genes, 121 annotations)
                                        is-aanchoring collagen +
                                        is-acollagen type XV
                                        is-acollagen type XXVI
                                        is-acollagen type XXVII
                                        is-acollagen type XXVIII
                                        is-afibrillar collagen +
                                        is-asheet-forming collagen +
                                        is-atransmembrane collagen +
                                is-acollagen and cuticulin-based cuticle extracellular matrix part +
                                is-acolumella
                                is-aectexine +
                                is-aelastic fiber
                                is-aendexine
                                is-aexine +
                                is-afibril +
                                is-afoot layer
                                is-agermination pore
                                is-aintine
                                is-alamina densa
                                is-alamina lucida
                                is-alamina reticularis
                                is-alaminin complex +
                                is-amiddle lamella
                                is-anexine
                                is-aperineuronal net
                                is-apollen coat
                                is-apollen wall +
                                is-asculpture element
                                is-asexine +
                                is-asynaptic cleft
                                is-atectum
                                is-athrombospondin complex
                                is-aUbisch body


Gene_Ontology
        is-acellular_component
                is-aextracellular matrix
                        is-aproteinaceous extracellular matrix
                                part-ofbasement membrane +
                                part-ofcollagen [GO:0005581] (89 genes, 121 annotations)
                                        is-aanchoring collagen +
                                        is-acollagen type XV
                                        is-acollagen type XXVI
                                        is-acollagen type XXVII
                                        is-acollagen type XXVIII
                                        is-afibrillar collagen +
                                        is-asheet-forming collagen +
                                        is-atransmembrane collagen +
                                is-acollagen and cuticulin-based cuticle extracellular matrix +
                                part-offibril +
                                is-ahyaline layer +
                                is-ainterphotoreceptor matrix
                                is-ainterstitial matrix


Gene_Ontology
        is-acellular_component
                is-aextracellular matrix part
                        is-aapical lamina of hyaline layer
                        is-abasal lamina +
                        is-abasement membrane +
                        is-abiofilm matrix part +
                        is-acollagen [GO:0005581] (89 genes, 121 annotations)
                                is-aanchoring collagen +
                                is-acollagen type XV
                                is-acollagen type XXVI
                                is-acollagen type XXVII
                                is-acollagen type XXVIII
                                is-afibrillar collagen +
                                is-asheet-forming collagen +
                                is-atransmembrane collagen +
                        is-acollagen and cuticulin-based cuticle extracellular matrix part +
                        is-acolumella
                        is-aectexine +
                        is-aelastic fiber
                        is-aendexine
                        is-aexine +
                        is-afibril +
                        is-afoot layer
                        is-agermination pore
                        is-aintine
                        is-alamina densa
                        is-alamina lucida
                        is-alamina reticularis
                        is-alaminin complex +
                        is-amiddle lamella
                        is-anexine
                        is-aperineuronal net
                        is-apollen coat
                        is-apollen wall +
                        is-asculpture element
                        is-asexine +
                        is-asynaptic cleft
                        is-atectum
                        is-athrombospondin complex
                        is-aUbisch body


Gene_Ontology
        is-acellular_component
                is-aextracellular region
                        part-ofextracellular region part
                                is-aactivin complex +
                                is-aangiogenin-PRI complex
                                is-aapical lamina of hyaline layer
                                is-aapoptotic body
                                is-abasal lamina +
                                is-abasement membrane +
                                is-ablood microparticle +
                                is-abursicon neuropeptide hormone complex
                                is-aclassical-complement-pathway C3/C5 convertase complex
                                is-aCNTFR-CLCF1 complex
                                is-acollagen [GO:0005581] (89 genes, 121 annotations)
                                        is-aanchoring collagen +
                                        is-acollagen type XV
                                        is-acollagen type XXVI
                                        is-acollagen type XXVII
                                        is-acollagen type XXVIII
                                        is-afibrillar collagen +
                                        is-asheet-forming collagen +
                                        is-atransmembrane collagen +
                                is-acollagen and cuticulin-based cuticle extracellular matrix part +
                                is-acomplement component C1 complex
                                is-aCRLF-CLCF1 complex
                                is-aextra-invasive hyphal space
                                is-aextracellular ferritin complex
                                is-aextracellular isoamylase complex
                                is-aextracellular organelle +
                                is-aextracellular space +
                                is-aextracellular space of host +
                                is-aextrahaustorial matrix
                                is-aextraorganismal space +
                                is-afemale germline ring canal inner rim
                                is-afemale germline ring canal outer rim
                                is-afibril +
                                is-afibrinogen complex
                                is-afollicle-stimulating hormone complex
                                is-ahyaluranon cable
                                is-aimmunoglobulin complex, circulating +
                                is-ainhibin complex +
                                is-ainsulin-like growth factor binding protein complex +
                                is-aintercellular bridge +
                                is-ainterleukin-12 complex
                                is-ainterleukin-23 complex
                                is-ainterleukin-27 complex
                                is-ainterleukin-35 complex
                                is-alamina densa
                                is-alamina lucida
                                is-alamina reticularis
                                is-alaminin complex +
                                is-alarval serum protein complex
                                is-amucus layer +
                                is-aother organism part +
                                is-aplasma lipoprotein particle +
                                is-aproteinaceous extracellular matrix +
                                is-ascaffoldin complex
                                is-aVEGF-A complex


Gene_Ontology
        is-acellular_component
                is-aextracellular region
                        part-ofextracellular region part
                                is-aproteinaceous extracellular matrix
                                        part-ofbasement membrane +
                                        part-ofcollagen [GO:0005581] (89 genes, 121 annotations)
                                                is-aanchoring collagen +
                                                is-acollagen type XV
                                                is-acollagen type XXVI
                                                is-acollagen type XXVII
                                                is-acollagen type XXVIII
                                                is-afibrillar collagen +
                                                is-asheet-forming collagen +
                                                is-atransmembrane collagen +
                                        is-acollagen and cuticulin-based cuticle extracellular matrix +
                                        part-offibril +
                                        is-ahyaline layer +
                                        is-ainterphotoreceptor matrix
                                        is-ainterstitial matrix


Gene_Ontology
        is-acellular_component
                is-aextracellular region part
                        is-aactivin complex +
                        is-aangiogenin-PRI complex
                        is-aapical lamina of hyaline layer
                        is-aapoptotic body
                        is-abasal lamina +
                        is-abasement membrane +
                        is-ablood microparticle +
                        is-abursicon neuropeptide hormone complex
                        is-aclassical-complement-pathway C3/C5 convertase complex
                        is-aCNTFR-CLCF1 complex
                        is-acollagen [GO:0005581] (89 genes, 121 annotations)
                                is-aanchoring collagen +
                                is-acollagen type XV
                                is-acollagen type XXVI
                                is-acollagen type XXVII
                                is-acollagen type XXVIII
                                is-afibrillar collagen +
                                is-asheet-forming collagen +
                                is-atransmembrane collagen +
                        is-acollagen and cuticulin-based cuticle extracellular matrix part +
                        is-acomplement component C1 complex
                        is-aCRLF-CLCF1 complex
                        is-aextra-invasive hyphal space
                        is-aextracellular ferritin complex
                        is-aextracellular isoamylase complex
                        is-aextracellular organelle +
                        is-aextracellular space +
                        is-aextracellular space of host +
                        is-aextrahaustorial matrix
                        is-aextraorganismal space +
                        is-afemale germline ring canal inner rim
                        is-afemale germline ring canal outer rim
                        is-afibril +
                        is-afibrinogen complex
                        is-afollicle-stimulating hormone complex
                        is-ahyaluranon cable
                        is-aimmunoglobulin complex, circulating +
                        is-ainhibin complex +
                        is-ainsulin-like growth factor binding protein complex +
                        is-aintercellular bridge +
                        is-ainterleukin-12 complex
                        is-ainterleukin-23 complex
                        is-ainterleukin-27 complex
                        is-ainterleukin-35 complex
                        is-alamina densa
                        is-alamina lucida
                        is-alamina reticularis
                        is-alaminin complex +
                        is-alarval serum protein complex
                        is-amucus layer +
                        is-aother organism part +
                        is-aplasma lipoprotein particle +
                        is-aproteinaceous extracellular matrix +
                        is-ascaffoldin complex
                        is-aVEGF-A complex


Gene_Ontology
        is-acellular_component
                is-aextracellular region part
                        is-aproteinaceous extracellular matrix
                                part-ofbasement membrane +
                                part-ofcollagen [GO:0005581] (89 genes, 121 annotations)
                                        is-aanchoring collagen +
                                        is-acollagen type XV
                                        is-acollagen type XXVI
                                        is-acollagen type XXVII
                                        is-acollagen type XXVIII
                                        is-afibrillar collagen +
                                        is-asheet-forming collagen +
                                        is-atransmembrane collagen +
                                is-acollagen and cuticulin-based cuticle extracellular matrix +
                                part-offibril +
                                is-ahyaline layer +
                                is-ainterphotoreceptor matrix
                                is-ainterstitial matrix


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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory