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Gene Ontology Browser
Term Detail
GO term:RNA polymerase II core promoter sequence-specific DNA binding
GO id:GO:0000979
Definition:Interacting selectively and non-covalently with the regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase II basal transcription machinery.
Number of paths to term: 20

is-adenotes an 'is-a' relationship
part-ofdenotes a 'part-of' relationship
regulatesdenotes a 'regulates' relationship
positively-regulatesdenotes a 'positively-regulates' relationship
negatively-regulatesdenotes a 'negatively-regulates' relationship


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aheterocyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-acore promoter binding
                                                                        is-acore promoter sequence-specific DNA binding
                                                                                is-abacterial-type RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-amitochondrial RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-aRNA polymerase I CORE element sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aheterocyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-aRNA polymerase II regulatory region DNA binding
                                                                        is-aRNA polymerase II regulatory region sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter proximal region sequence-specific DNA binding +
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)
                                                                                is-aRNA polymerase II distal enhancer sequence-specific DNA binding
                                                                                is-aRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aheterocyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-atranscription regulatory region sequence-specific DNA binding
                                                                        is-acore promoter sequence-specific DNA binding
                                                                                is-abacterial-type RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-amitochondrial RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-aRNA polymerase I CORE element sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aheterocyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-atranscription regulatory region sequence-specific DNA binding
                                                                        is-aRNA polymerase II regulatory region sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter proximal region sequence-specific DNA binding +
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)
                                                                                is-aRNA polymerase II distal enhancer sequence-specific DNA binding
                                                                                is-aRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aheterocyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-asequence-specific DNA binding
                                                        is-atranscription regulatory region sequence-specific DNA binding
                                                                is-acore promoter sequence-specific DNA binding
                                                                        is-abacterial-type RNA polymerase core promoter sequence-specific DNA binding
                                                                        is-amitochondrial RNA polymerase core promoter sequence-specific DNA binding
                                                                        is-aRNA polymerase I CORE element sequence-specific DNA binding
                                                                        is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aheterocyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-asequence-specific DNA binding
                                                        is-atranscription regulatory region sequence-specific DNA binding
                                                                is-aRNA polymerase II regulatory region sequence-specific DNA binding
                                                                        is-aRNA polymerase II core promoter proximal region sequence-specific DNA binding +
                                                                        is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)
                                                                        is-aRNA polymerase II distal enhancer sequence-specific DNA binding
                                                                        is-aRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aheterocyclic compound binding
                                is-anucleic acid binding
                                        is-aregulatory region nucleic acid binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-acore promoter binding
                                                                        is-acore promoter sequence-specific DNA binding
                                                                                is-abacterial-type RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-amitochondrial RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-aRNA polymerase I CORE element sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aheterocyclic compound binding
                                is-anucleic acid binding
                                        is-aregulatory region nucleic acid binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-aRNA polymerase II regulatory region DNA binding
                                                                        is-aRNA polymerase II regulatory region sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter proximal region sequence-specific DNA binding +
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)
                                                                                is-aRNA polymerase II distal enhancer sequence-specific DNA binding
                                                                                is-aRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aheterocyclic compound binding
                                is-anucleic acid binding
                                        is-aregulatory region nucleic acid binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-atranscription regulatory region sequence-specific DNA binding
                                                                        is-acore promoter sequence-specific DNA binding
                                                                                is-abacterial-type RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-amitochondrial RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-aRNA polymerase I CORE element sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aheterocyclic compound binding
                                is-anucleic acid binding
                                        is-aregulatory region nucleic acid binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-atranscription regulatory region sequence-specific DNA binding
                                                                        is-aRNA polymerase II regulatory region sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter proximal region sequence-specific DNA binding +
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)
                                                                                is-aRNA polymerase II distal enhancer sequence-specific DNA binding
                                                                                is-aRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aorganic cyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-acore promoter binding
                                                                        is-acore promoter sequence-specific DNA binding
                                                                                is-abacterial-type RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-amitochondrial RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-aRNA polymerase I CORE element sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aorganic cyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-aRNA polymerase II regulatory region DNA binding
                                                                        is-aRNA polymerase II regulatory region sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter proximal region sequence-specific DNA binding +
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)
                                                                                is-aRNA polymerase II distal enhancer sequence-specific DNA binding
                                                                                is-aRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aorganic cyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-atranscription regulatory region sequence-specific DNA binding
                                                                        is-acore promoter sequence-specific DNA binding
                                                                                is-abacterial-type RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-amitochondrial RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-aRNA polymerase I CORE element sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aorganic cyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-atranscription regulatory region sequence-specific DNA binding
                                                                        is-aRNA polymerase II regulatory region sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter proximal region sequence-specific DNA binding +
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)
                                                                                is-aRNA polymerase II distal enhancer sequence-specific DNA binding
                                                                                is-aRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aorganic cyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-asequence-specific DNA binding
                                                        is-atranscription regulatory region sequence-specific DNA binding
                                                                is-acore promoter sequence-specific DNA binding
                                                                        is-abacterial-type RNA polymerase core promoter sequence-specific DNA binding
                                                                        is-amitochondrial RNA polymerase core promoter sequence-specific DNA binding
                                                                        is-aRNA polymerase I CORE element sequence-specific DNA binding
                                                                        is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aorganic cyclic compound binding
                                is-anucleic acid binding
                                        is-aDNA binding
                                                is-asequence-specific DNA binding
                                                        is-atranscription regulatory region sequence-specific DNA binding
                                                                is-aRNA polymerase II regulatory region sequence-specific DNA binding
                                                                        is-aRNA polymerase II core promoter proximal region sequence-specific DNA binding +
                                                                        is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)
                                                                        is-aRNA polymerase II distal enhancer sequence-specific DNA binding
                                                                        is-aRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aorganic cyclic compound binding
                                is-anucleic acid binding
                                        is-aregulatory region nucleic acid binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-acore promoter binding
                                                                        is-acore promoter sequence-specific DNA binding
                                                                                is-abacterial-type RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-amitochondrial RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-aRNA polymerase I CORE element sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aorganic cyclic compound binding
                                is-anucleic acid binding
                                        is-aregulatory region nucleic acid binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-aRNA polymerase II regulatory region DNA binding
                                                                        is-aRNA polymerase II regulatory region sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter proximal region sequence-specific DNA binding +
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)
                                                                                is-aRNA polymerase II distal enhancer sequence-specific DNA binding
                                                                                is-aRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aorganic cyclic compound binding
                                is-anucleic acid binding
                                        is-aregulatory region nucleic acid binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-atranscription regulatory region sequence-specific DNA binding
                                                                        is-acore promoter sequence-specific DNA binding
                                                                                is-abacterial-type RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-amitochondrial RNA polymerase core promoter sequence-specific DNA binding
                                                                                is-aRNA polymerase I CORE element sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)


Gene_Ontology
        is-amolecular_function
                is-abinding
                        is-aorganic cyclic compound binding
                                is-anucleic acid binding
                                        is-aregulatory region nucleic acid binding
                                                is-aregulatory region DNA binding
                                                        is-atranscription regulatory region DNA binding
                                                                is-atranscription regulatory region sequence-specific DNA binding
                                                                        is-aRNA polymerase II regulatory region sequence-specific DNA binding
                                                                                is-aRNA polymerase II core promoter proximal region sequence-specific DNA binding +
                                                                                is-aRNA polymerase II core promoter sequence-specific DNA binding [GO:0000979] (46 genes, 49 annotations)
                                                                                is-aRNA polymerase II distal enhancer sequence-specific DNA binding
                                                                                is-aRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding


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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory