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Mammalian Phenotype Ontology Annotations
Query Results - Summary
486 genotypes with 687 annotations displayed of selected term and subterms
Searched Term: abnormal brainstem morphology
Allelic Composition
(Genetic Background)		 Annotated Term Reference
Acvr1tm1Mak/Acvr1+
Olig2tm1.1(cre)Wdr/Olig2+
(involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal brainstem morphology J:285841
Adgrg1tm1Lex/Adgrg1tm1Lex
(involves: 129 * BALB/c * C57BL/6 * FVB/N) 		abnormal pontine nuclei morphology J:149816
Adh7tm1Gdu/Adh7tm1Gdu
(B6.129(Cg)-Adh7tm1Gdu) 		abnormal substantia nigra morphology J:167234
Agtpbp1pcd/Agtpbp1pcd
(involves: C57BR/cdJ) 		abnormal cochlear VIII nucleus morphology J:121314
Ambra1em1(IMPC)Bay/Ambra1em1(IMPC)Bay
(C57BL/6N-Ambra1em1(IMPC)Bay/BayMmucd) 		abnormal midbrain morphology J:211773
Anapc15tm1.1(KOMP)Vlcg/Anapc15tm1.1(KOMP)Vlcg
(B6N(Cg)-Anapc15tm1.1(KOMP)Vlcg/J) 		abnormal midbrain morphology J:211773
Ap3b1pe/Ap3b1pe
(B6.C3-Ap3b1pe/J) 		abnormal midbrain roof plate morphology J:29747
abnormal superior colliculus morphology J:12089
Apaf1Gt(IRESBetageo)XIX18Pgr/Apaf1Gt(IRESBetageo)XIX18Pgr
(involves: 129S1/Sv * 129X1/SvJ * NMRI) 		midbrain hyperplasia J:49840
ApcMin/Apctm1Tno
(involves: 129 * 129S4/SvJae * C57BL/6) 		absent midbrain J:156864
Apctm1.1Tno/Apctm1Tno
(involves: 129 * 129S4/SvJae * BALB/cJ * C57BL/6) 		absent midbrain J:156864
Apctm3Mmt/Apctm3Mmt
(involves: 129X1/SvJ * C57BL/6N) 		absent midbrain J:81402
Arhgef2Gt(IST13976A8)Tigm/Arhgef2Gt(IST13976A8)Tigm
(involves: C57BL/6N) 		abnormal brainstem morphology J:242973
Ascl1tm1(Neurog2)Fgu/Ascl1tm1(Neurog2)Fgu
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal locus ceruleus morphology J:74525
Ascl1tm1And/Ascl1tm1And
Neurod4tm1Kag/Neurod4tm1Kag
(either: (involves: 129S2/SvPas * C57BL/6 * CBA) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * CBA)) 		abnormal tectum morphology J:65410
small tectum J:65410
Asic2tm1.1Lzd/Asic2tm1.1Lzd
(B6.129-Asic2tm1.1Lzd) 		abnormal brainstem morphology J:151304
Asic3tm1Pho/Asic3tm1Pho
(B6.Cg-Acic3tm1Pho) 		abnormal brainstem morphology J:151304
Aspatm1Mata/Aspatm1Mata
(involves: 129S5/SvEvBrd) 		abnormal brainstem morphology J:89100
Atg5tm1Myok/Atg5tm1Myok
Tg(Nes-cre)1Kln/?
(involves: 129S/SvEv * C57BL/6 * SJL) 		abnormal inferior colliculus morphology J:110050
Atg7tm1Tchi/Atg7tm1Tchi
En1tm2(cre)Wrst/En1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6NCrlj * CBA/JNCrlj) 		abnormal substantia nigra pars compacta morphology J:192452
Atg7tm1Tchi/Atg7tm1Tchi
Slc6a3tm1(cre)Xz/Slc6a3+
(involves: 129S1/Sv * C57BL/6NCrlj * CBA/JNCrlj) 		abnormal substantia nigra pars compacta morphology J:192452
Atoh1tm1(cre/ERT2)Mhos/Atoh1tm1(cre/ERT2)Mhos
(Not Specified) 		abnormal cochlear VIII nucleus morphology J:149533
Atp1b2tm1Msch/Atp1b2tm1Msch
(involves: 129S2/SvPas * C57BL/6J) 		abnormal brainstem morphology J:21121
Atp2b2dfw/Atp2b2dfw
(C3H/HeJ-Atp2b2dfw/J) 		abnormal cochlear VIII nucleus morphology J:121326
Atp7aMo-ml/Y
(involves: C3Hf/He) 		decreased brainstem copper level J:12745
Atrnmg-6J/Atrnmg-6J
(involves: C3H/HeSnJ * CAST/Ei) 		abnormal medulla oblongata morphology J:96070
B4galnt1tm1Rlp/B4galnt1tm1Rlp
St3gal5tm1Rlp/St3gal5tm1Rlp
(involves: 129S6/SvEvTac * C57BL/6) 		abnormal brainstem morphology J:96830
Bag6tm1Pmc/Bag6tm1Pmc
(involves: 129S1/Sv * C57BL/6) 		abnormal midbrain morphology J:119857
Baxtm1Sjk/Baxtm1Sjk
(involves: 129X1/SvJ) 		abnormal facial motor nucleus morphology J:35372
Bbox1tm1b(KOMP)Wtsi/Bbox1tm1b(KOMP)Wtsi
(C57BL/6N-Bbox1tm1b(KOMP)Wtsi/Bay) 		abnormal midbrain morphology J:211773
Bcl2tm1Mpin/Bcl2tm1Mpin
(involves: 129S2/SvPas * C57BL/6) 		abnormal facial motor nucleus morphology J:34326
Bcl2l1tm1.1Mam/Bcl2l1tm1.1Mam
7630403G23RikTg(Th-cre)1Tmd/?
(involves: 129S6/SvEvTac * C57BL/6 * SJL) 		abnormal locus ceruleus morphology J:99848
decreased substantia nigra size J:99848
Bdnftm1Jae/Bdnftm1Jae
(involves: 129S4/SvJae) 		small mesencephalic trigeminal nucleus J:17123
Bdnftm1Krj/Bdnftm1Lfr
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S2/SvPas * C57BL/6 * CBA) 		abnormal substantia nigra morphology J:99291
abnormal substantia nigra pars compacta morphology J:99291
Bdnftm1Lfr/Bdnftm1Lfr
(involves: 129S2/SvPas * C57BL/6) 		small mesencephalic trigeminal nucleus J:67231
Bhlhe22tm1Gan/Bhlhe22tm1Gan
(involves: 129S7/SvEvBrd) 		abnormal pyramidal decussation morphology J:144066
Bicd2tm1.1Hgrd/Bicd2tm1.1Hgrd
(involves: C57BL/6) 		cerebral aqueductal stenosis J:210236
Cacna1atg-rol/Cacna1atg-rol
(involves: C57BL/6 * SIII) 		abnormal brainstem morphology J:6553
Cacna1dtm1Hgn/Cacna1dtm1Hgn
Egr2tm2(cre)Pch/Egr2+
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ) 		abnormal pons morphology J:185977
Cacna2d2du/Cacna2d2du
(TKDU) 		abnormal medulla oblongata morphology J:152373
decreased pons size J:152373
Caluem1(IMPC)Tcp/Caluem1(IMPC)Tcp
(C57BL/6N-Caluem1(IMPC)Tcp/Tcp) 		abnormal midbrain morphology J:211773
Casp2tm1Yuan/Casp2tm1Yuan
(involves: 129S4/SvJae * C57BL/6J * DBA/2) 		abnormal facial motor nucleus morphology J:47601
Casp3tm1Flv/Casp3tm1Flv
(involves: 129S1/Sv * C57BL/6) 		abnormal brainstem morphology J:36821
Casp9tm1Flv/Casp9tm1Flv
(involves: 129S1/Sv * C57BL/6) 		increased midbrain size J:49088
CbllTg(Alb-KL)7-2Mhos/CbllTg(Alb-KL)7-2Mhos
(involves: C57BL/6) 		abnormal inferior olivary complex morphology J:100997
Ccdc85chhy/Ccdc85chhy
(involves: BALB/cHeA * STS/A) 		abnormal midbrain morphology J:93608
cerebral aqueductal stenosis J:93608
Ccnftm1.1Sje/Ccnftm1.1Sje
(involves: 129S7/SvEvBrd * C57BL/6) 		midbrain hypoplasia J:89060
Cd247tm1Lov/Cd247tm1Lov
(involves: 129S4/SvJae) 		abnormal superior colliculus morphology J:66246
Cdc42tm1.1Rac/Cdc42tm1.1Rac
Tg(Nes-cre)1Kln/0
(involves: 129P2/OlaHsd * C57BL/6 * FVB/N * SJL) 		abnormal cerebral aqueduct morphology J:197886
cerebral aqueductal stenosis J:197886
Cdkn1ctm1Bbd/Cdkn1ctm1Bbd
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal midbrain morphology J:88146
Cecr2tm2b(EUCOMM)Hmgu/Cecr2+
(C57BL/6N-Cecr2tm2b(EUCOMM)Hmgu/Tcp) 		abnormal midbrain morphology J:211773
Cecr2tm2b(EUCOMM)Hmgu/Cecr2tm2b(EUCOMM)Hmgu
(C57BL/6N-Cecr2tm2b(EUCOMM)Hmgu/Tcp) 		abnormal midbrain morphology J:211773
Cfap206tm1.2Gos/Cfap206tm1.2Gos
(involves: 129 * C57BL/6J * CD-1 * SJL) 		cerebral aqueductal stenosis J:293391
Chd7Gt(XK403)Byg/Chd7+
Fgf8tm2Mrt/Fgf8+
(involves: 129 * 129P2/OlaHsd * C57BL/6J * DBA/2J) 		abnormal inferior colliculus morphology J:207892
Chrnb2tm1Jpc/Chrnb2tm1Jpc
(B6.129P2-Chrnb2tm1Jpc) 		abnormal superior colliculus morphology J:77377
Cittm1Fdc/Cittm1Fdc
(either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)) 		decreased midbrain size J:77297
Clcf1tm1Zou/Clcf1tm1Zou
(involves: 129X1/SvJ * NIHS) 		abnormal facial motor nucleus morphology J:164637
Clcn2tm1Tjj/Clcn2tm1Tjj
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal brainstem morphology J:122365
Cln3tm1Nbm/Cln3tm1Nbm
(involves: 129S6/SvEvTac * NIH Black Swiss) 		abnormal brainstem morphology J:58230
Cntfrtm1Gdy/Cntfrtm1Gdy
(involves: 129P2/OlaHsd * C57BL/6) 		small facial motor nucleus J:29357
small trigeminal motor nucleus J:29357
Cntnap4em1Smoc/Cntnap4em1Smoc
(C57BL/6J-Cntnap4em1Smoc) 		abnormal substantia nigra pars compacta morphology J:287186
cod/cod
(involves: BALB/cGr) 		abnormal brainstem morphology J:13855
Criptotm1Mms/Criptotm2Mms
(involves: 129S6/SvEvTac * C57BL/6) 		decreased midbrain size J:104418
Criptotm2Mms/Criptotm2.1Mms
(involves: 129S6/SvEvTac * C57BL/6) 		decreased midbrain size J:104418
Crygntm1a(EUCOMM)Wtsi/Crygntm1a(EUCOMM)Wtsi
Egr2tm2(cre)Pch/Egr2+
(involves: 129S2/SvPas * C57BL/6N) 		abnormal pons morphology J:236916
Csnk2a1tm1Dcs/Csnk2a1tm1Dcs
(involves: 129S6/SvEvTac * C57BL/6) 		decreased midbrain size J:129208
Ctnnb1tm2Kem/Ctnnb1tm2.1Kem
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129/Sv * C57BL/6 * CBA) 		abnormal trigeminal V mesencephalic nucleus morphology J:67966
absent midbrain J:67966
Ctnnb1tm2Kem/Ctnnb1tm2Kem
Gt(ROSA)26Sortm1Sor/Gt(ROSA)26Sor+
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129 * C57BL/6 * CBA/J) 		absent midbrain J:178971
Ctnnb1tm2Kem/Ctnnb1tm3Kba
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129 * C57BL/6 * CBA/J) 		abnormal midbrain morphology J:178971
Cycstm1Mak/Cycstm1Mak
(involves: C57BL/6) 		midbrain hyperplasia J:98949
Dbx1tm1Tmj/Dbx1tm1Tmj
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal medulla oblongata morphology J:165285
abnormal pre-Botzinger complex morphology J:165285
Dbx1tm2(cre)Apie/Dbx1+
Robo3tm1.1Ache/Robo3tm1.1Ache
(involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6) 		abnormal medulla oblongata morphology J:165285
abnormal pre-Botzinger complex morphology J:165285
Dcckanga/Dcckanga
(involves: AKR * C3H) 		abnormal pontine nuclei morphology J:80430
abnormal pyramidal decussation morphology J:80430
Dcckanga/Dcctm1Wbg
(involves: 129X1/SvJ * AKR * C3H) 		abnormal pyramidal decussation morphology J:80430
Dcctm1Wbg/Dcctm1Wbg
(involves: 129S2/SvPas) 		abnormal pontine nuclei morphology J:39765
Dclk1tm1Caw/Dclk1tm1Caw
Dcxtm1Caw/Y
(involves: 129S6/SvEvTac * 129X1/SvJ * C57BL/6J) 		abnormal brainstem morphology J:105301
Ddb1tm1Spg/Ddb1tm1Spg
Tg(Nes-cre)1Kln/0
(involves: 129P2/OlaHsd * C57BL/6 * SJL) 		abnormal cerebral aqueduct morphology J:117820
Del(5D5Mit73-D5Mit351)5Jcs/+
(involves: 129S4/SvJae * C57BL/6J) 		abnormal corpora quadrigemina morphology J:67077
Del(5D5Mit148-Qdpr)2Jcs/+
(involves: 129S4/SvJae * C57BL/6J) 		abnormal corpora quadrigemina morphology J:67077
Del(5D5Mit388-D5Mit351)4Jcs/+
(involves: 129S4/SvJae * C57BL/6J) 		abnormal corpora quadrigemina morphology J:67077
Del(5Letm1-Htt)1Jcs/+
(involves: 129S4/SvJae * C57BL/6J) 		abnormal corpora quadrigemina morphology J:67077
Del(7Coro1a-Spn)1Dolm/+
(involves: 129P2/OlaHsd * 129S1/Sv * C57BL/6N * CD-1) 		increased inferior colliculus size J:210018
increased superior colliculus size J:210018
Del(19Cyp26a1-Cyp26c1)1Hmd/Del(19Cyp26a1-Cyp26c1)1Hmd
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		midbrain hypoplasia J:119939
Del(19Poll-Dcpd)1Nmt/Del(19Poll-Dcpd)1Nmt
(involves: 129P2/OlaHsd) 		abnormal cerebral aqueduct morphology J:75779
Dennd1aem1Jgfu/Dennd1aem1Jgfu
(Not Specified) 		increased midbrain size J:276703
Dkk1tm1Lmgd/Dkk1tm1Lmgd
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		decreased midbrain size J:71787
Dlg5tm1Vv/Dlg5tm1Vv
(involves: 129 * C57BL/6) 		abnormal cerebral aqueduct morphology J:124940
Dnm1ltm1.1Miha/Dnm1ltm1.1Miha
Tg(Nes-cre)1Kln/0
(involves: C57BL/6 * C57BL/6J * SJL) 		abnormal brainstem morphology J:158142
Dp(10Prmt2-Pdxk)2Yey/0
Dp(16Lipi-Zbtb21)1Yey/0
Dp(17Abcg1-Rrp1b)3Yey/0
(B6.129S7-Dp(10Prmt2-Pdxk)2Yey Dp(16Lipi-Zbtb21)1Yey Dp(17Abcg1-Rrp1b)3Yey) 		cerebral aqueductal stenosis J:161325
Dscamdel17/Dscamdel17
(involves: BALB/cByJ * C57BL/6J) 		enlarged cerebral aqueduct J:222353
Dstdt-23Rbrc/Dstdt-23Rbrc
(involves: C3H/HeN * C57BL/6) 		abnormal brainstem morphology J:251779
DstGt(E182H05)Wrst/DstGt(E182H05)Wrst
(B6NCrj.129P2-DstGt(E182H05)Wrst) 		abnormal brainstem morphology J:251779
abnormal trigeminal motor nucleus morphology J:228781
Dync2i1Tn(pb-Act-RFP)1.1Zhu/Dync2i1Tn(pb-Act-RFP)1.1Zhu
(involves: FVB/NJ) 		decreased midbrain size J:335806
Dync2i2Tn(pb-Act-RFP)1.1Zhu/Dync2i2Tn(pb-Act-RFP)1.1Zhu
(involves: C57BL/6 * FVB/NJ) 		decreased midbrain size J:335806
Dyrk1aem1Kzy/Dyrk1a+
(C57BL/6J-Dyrk1aem1Kzy) 		abnormal midbrain size J:259596
Dyrk1atm1Mla/Dyrk1a+
(involves: 129P2/OlaHsd * C57BL/6) 		decreased midbrain size J:78597
decreased superior colliculus size J:78597
small tectum J:78597
E2f1Tg(Wnt1-cre)2Sor/E2f1+
Snrpbem1Lajm/Snrpb+
(involves: C3H * C57BL/6 * C57BL/6J * CD1) 		midbrain hypoplasia J:326544
Eef1dtm1.2Mkma/Eef1dtm1.2Mkma
(B6J.B6N(Cg)-Eef1dtm1.2Mkma) 		midbrain atrophy J:288930
Efcab3em1(IMPC)Wtsi/Efcab3em1(IMPC)Wtsi
(C57BL/6N-Efcab3em1(IMPC)Wtsi/Wtsi) 		increased pontine nuclei size J:267883
Egr2tm2(cre)Pch/Egr2+
Phox2btm4Jbr/Phox2b+
(involves: 129S2/SvPas * C57BL/6 * DBA/2) 		abnormal retrotrapezoid nucleus morphology J:176573
Egr2tm2(cre)Pch/Egr2+
Robo3tm1.1Ache/Robo3tm1.1Ache
Tg(Mnx1-EGFP)#Tmj/0
(involves: 129S2/SvPas * C57BL/6 * DBA) 		abnormal pons morphology J:158918
Eif4hGt(Ex279)Byg/Eif4hGt(Ex279)Byg
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal brainstem morphology J:181945
Emx2tm1Sia/Emx2tm1Sia
Otx1tm1Sia/Otx1tm1Sia
(involves: C57BL/6 * CBA) 		abnormal pretectal region morphology J:98539
Emx2tm1Sia/Emx2tm1Sia
Otx2tm1Sia/Otx2+
(involves: C57BL/6 * CBA) 		abnormal midbrain morphology J:70745
abnormal pretectal region morphology J:70745
enlarged tectum J:70745
Emx2tm1Sia/Emx2tm1Sia
Pax6Sey/Pax6Sey
(involves: C57BL/6 * CBA) 		abnormal pretectal region morphology J:98539
abnormal tectum morphology J:98539
En1tm1(Otx2)Wrst/En1+
(either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)) 		abnormal corpora quadrigemina morphology J:57538
increased inferior colliculus size J:57538
increased superior colliculus size J:57538
En1tm1(Wnt1)Wrst/En1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		increased inferior colliculus size J:91004
En1tm1(Wnt1)Wrst/En1tm1(Wnt1)Wrst
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		increased inferior colliculus size J:91004
En1tm1.1(Wnt1)Wrst/En1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		increased inferior colliculus size J:91004
En1tm1Alj/En1tm1Alj
(either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6J)) 		decreased inferior colliculus size J:19212
En1tm1Alj/En1tm1Alj
(B6.129-En1tm1Alj) 		decreased inferior colliculus size J:84363
En1tm1Alj/En1tm8.1Alj
En2tm1Alj/En2tm6Alj
Gt(ROSA)26Sortm1(cre/ERT2)Alj/Gt(ROSA)26Sor+
(involves: 129S2/SvPas * 129S6/SvEvTac * Swiss Webster) 		abnormal midbrain morphology J:156169
En1tm1Gld/En1tm1Gld
(involves: 129S/SvEv * C57BL/6) 		decreased midbrain size J:52637
En1tm2(cre)Wrst/?
Gli3tm1Alj/Gli3tm1Alj
(involves: 129S1/Sv * 129S6/SvEvTac * 129X1/SvJ * C57BL/6) 		abnormal tectum morphology J:137136
enlarged cerebral aqueduct J:137136
enlarged tectum J:137136
En1tm2(cre)Wrst/?
Gli3tm1Alj/Gli3tm1Alj
Smotm2Amc/Smotm2Amc
(involves: 129S1/Sv * 129S6/SvEvTac * 129X1/SvJ * C57BL/6) 		abnormal tectum morphology J:137136
enlarged cerebral aqueduct J:137136
enlarged tectum J:137136
En1tm2(cre)Wrst/En1+
Fgfr1tm1Jpa/Fgfr1tm1Jpa
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal locus ceruleus morphology J:83004
abnormal midbrain morphology J:83004
absent inferior colliculus J:83004
En1tm2(cre)Wrst/En1+
Gbx2tm1.1Mrt/Gbx2tm1.1Alj
(involves: 129/Sv * C57BL/6 * SJL * Swiss Webster) 		increased inferior colliculus size J:79431
En1tm2(cre)Wrst/En1+
Tor1atm1Wtd/Tor1atm3.1Wtd
(involves: 129P2/OlaHsd * 129S7/SvEvBrd * C57BL/6J) 		abnormal red nucleus morphology J:213785
En1tm2(cre)Wrst/En1+
Tor1atm2Wtd/Tor1atm3.1Wtd
(involves: 129S1/Sv * 129S6/SvEvTac * C57BL/6J * SJL) 		abnormal red nucleus morphology J:213785
En1tm2(cre)Wrst/En1tm8.1Alj
(involves: 129/Sv * Black Swiss * C57BL/6 * SJL) 		abnormal inferior colliculus morphology J:134516
En1tm2(cre)Wrst/En1tm8.1Alj
En2tm2Alj/En2+
(involves: 129/Sv * Black Swiss * C57BL/6 * SJL * Swiss Webster) 		absent inferior colliculus J:134516
decreased superior colliculus size J:134516
En1tm2(cre)Wrst/En1tm8.1Alj
En2tm2Alj/En2tm2Alj
(involves: 129/Sv * Black Swiss * C57BL/6 * SJL * Swiss Webster) 		absent colliculi J:134516
absent inferior colliculus J:134516
absent superior colliculus J:134516
absent tectum J:134516
En1tm2Alj/En1+
En2tm2Alj/En2tm2Alj
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		abnormal tectum morphology J:134516
absent inferior colliculus J:134516
decreased inferior colliculus size J:134516
small tectum J:134516
En1tm2Alj/En1tm2Alj
(involves: 129S1/Sv * 129X1/SvJ * Swiss Webster) 		absent inferior colliculus J:134516
decreased midbrain size J:134516
decreased superior colliculus size J:134516
En1tm2Alj/En1tm2Alj
En2tm2Alj/En2+
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		absent colliculi J:134516
absent inferior colliculus J:134516
absent superior colliculus J:134516
absent tectum J:134516
En1tm2Alj/En1tm2Alj
En2tm2Alj/En2tm2Alj
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		absent colliculi J:134516
absent inferior colliculus J:134516
absent midbrain J:66592
absent superior colliculus J:134516
absent tectum J:134516
En1tm2Alj/En1tm3(En2)Alj
En2tm2Alj/En2tm2Alj
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		decreased inferior colliculus size J:134516
En1tm4(en)Alj/En1tm4(en)Alj
(involves: 129S1/Sv * 129X1/SvJ) 		decreased inferior colliculus size J:50311
En1tm5(en)Alj/En1+
En2tm2Alj/En2tm2Alj
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		decreased inferior colliculus size J:134516
En1tm5(en)Alj/En1tm5(en)Alj
(involves: 129S1/Sv * 129X1/SvJ) 		decreased midbrain size J:50311
En1tm5(en)Alj/En1tm5(en)Alj
En2tm2Alj/En2+
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		decreased inferior colliculus size J:134516
En1tm5(en)Alj/En1tm5(en)Alj
En2tm2Alj/En2tm2Alj
(involves: 129S1/Sv * 129S2/SvPas * 129X1/SvJ * Swiss Webster) 		absent inferior colliculus J:134516
absent superior colliculus J:134516
decreased superior colliculus size J:134516
En1tm7(cre/ESR1)Alj/0
Fgf8tm1.1Jyhl/Fgf8tm1.3Mrt
(involves: 129P2/OlaHsd * 129S6/SvEvTac) 		abnormal midbrain morphology J:156717
abnormal Raphe nucleus morphology J:156717
abnormal substantia nigra morphology J:156717
En1tm7(cre/ESR1)Alj/0
Fgf8tm1.3Mrt/Fgf8tm1.4Mrt
(involves: 129P2/OlaHsd * 129S6/SvEvTac) 		abnormal midbrain morphology J:156717
abnormal Raphe nucleus morphology J:156717
abnormal substantia nigra morphology J:156717
En1tm7(cre/ESR1)Alj/En1+
En2tm2Alj/En2tm2Alj
Gt(ROSA)26Sortm1Sor/Gt(ROSA)26Sor+
(involves: 129S1/Sv * 129S4/SvJaeSor * 129S6/SvEvTac * 129X1/SvJ * Swiss Webster) 		abnormal tectum morphology J:134516
decreased midbrain size J:134516
En2tm1Alj/En2tm1Alj
(involves: 129/Sv * 129S2/SvPas) 		decreased colliculi size J:17203
En2tm2Alj/En2tm2Alj
(involves: 129S2/SvPas * Swiss Webster) 		decreased inferior colliculus size J:134516
Eno2tm1(DTA)Hsak/Eno2+
Tg(Gpr151-cre)#Ito/0
(involves: C57BL/6) 		abnormal midbrain morphology J:214076
Erbb3tm1Gne/Erbb3tm1Gne
(involves: 129S2/SvPas * C57BL/6) 		abnormal cerebral aqueduct morphology J:45302
abnormal midbrain morphology J:45302
Erftm1Gmav/Erftm1Gmav
(involves: 129S4/SvJae * C57BL/6 * CBA) 		midbrain hypoplasia J:123628
Esr2tm1Unc/Esr2tm1Unc
(involves: 129P2/OlaHsd * C57BL/6J) 		abnormal substantia nigra morphology J:67862
Ext1tm1Yama/Ext1tm1Yama
Tg(Nes-cre)1Kln/0
(involves: 129S5/SvEvBrd * C57BL/6 * SJL) 		absent inferior colliculus J:86465
Fbxw7tm1.1Axbe/Fbxw7tm1.1Axbe
Juntm4Wag/Jun+
Tg(Nes-cre)1Kln/0
(involves: 129P2/OlaHsd * C57BL/6 * SJL) 		abnormal tectum morphology J:166928
Fbxw7tm1.1Axbe/Fbxw7tm1.1Axbe
Tg(Nes-cre)1Kln/0
(involves: C57BL/6 * SJL) 		abnormal tectum morphology J:166928
Fgf8tm1.1Mrt/Fgf8tm1.1Mrt
(involves: 129P2/OlaHsd) 		absent inferior colliculus J:45909
Fgf8tm1.1Mrt/Fgf8tm1.2Mrt
(involves: 129P2/OlaHsd) 		abnormal midbrain morphology J:45909
absent inferior colliculus J:45909
Fgf8tm1.4Mrt/Fgf8+
Fgf17tm1Dor/Fgf17tm1Dor
(involves: 129P2/OlaHsd * 129S6/SvEvTac) 		decreased inferior colliculus size J:61429
Fgf8tm1.4Mrt/Fgf8+
Gli3tm1.1Alj/Gli3tm1.1Alj
(involves: 129P2/OlaHsd * 129S6/SvEvTac * C57BL/6) 		absent inferior colliculus J:137136
enlarged tectum J:137136
Fgf17tm1Dor/Fgf17tm1Dor
(involves: 129S6/SvEvTac) 		decreased inferior colliculus size J:61429, J:156717
Fgf17tm1Dor/Fgf17tm1Dor
Fgf8tm1.1Jyhl/Fgf8tm1.1Jyhl
(involves: 129S6/SvEvTac) 		decreased inferior colliculus size J:156717
Fgfr1tm1Jpa/Fgfr1tm1Jpa
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * CBA) 		absent inferior colliculus J:83004
Fgfr1tm1Jrt/Fgfr1tm1Jrt
(either: (involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) or (involves: 129S1/Sv * 129X1/SvJ * CD-1)) 		abnormal midbrain morphology J:22117
Fgfr1tm2Jrt/Fgfr1tm2Jrt
(involves: 129S1/Sv * 129X1/SvJ) 		decreased inferior colliculus size J:83004
Fgfr1tm6Jrt/Fgfr1tm6Jrt
(involves: 129S1/Sv * 129X1/SvJ) 		decreased inferior colliculus size J:83004
Fkrptm1Itl/Fkrptm1Itl
(involves: 129S6/SvEvTac * C57BL/6N) 		abnormal brainstem morphology J:164448
Fkrptm1Scbr/?
(Not Specified) 		abnormal inferior colliculus morphology J:258757
abnormal superior colliculus morphology J:258757
abnormal tectum morphology J:258757
Foxb1tm1Lby/Foxb1tm1Lby
(involves: 129S6/SvEvTac * Black Swiss) 		decreased inferior colliculus size J:67882
Foxb1tm1Lby/Foxb1tm1Lby
(B6.129S6-Foxb1tm1Lby) 		decreased inferior colliculus size J:67882
Foxb1tm1Pgr/Foxb1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal midbrain morphology J:44764
decreased inferior colliculus size J:44764
Foxb1tm1Pgr/Foxb1tm1Pgr
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal midbrain morphology J:44764
decreased inferior colliculus size J:44764
Foxc1ch/Foxc1ch
(involves: CBA * STOCK Tyrc f) 		abnormal cerebral aqueduct morphology J:75733
Fts/Fts
(involves: C57BL/6 * SJL) 		absent midbrain J:20159
FuzGt(AN0439)Wtsi/FuzGt(AN0439)Wtsi
(involves: 129P2/OlaHsd * C3H) 		abnormal midbrain morphology J:154370
Galctwi/Galctwi
(involves: C57BL/6J * CAST/EiJ * CE/J) 		abnormal medulla oblongata morphology J:126892
abnormal pons morphology J:126892
Gas2l2tm1a(KOMP)Wtsi/Gas2l2tm1a(KOMP)Wtsi
(C57BL/6N-Gas2l2tm1a(KOMP)Wtsi/Wtsi) 		abnormal midbrain morphology J:239583
Gata3tm1Jfz/Gata3tm1Jfz
Tg(Fev-cre)1Esd/0
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * SJL) 		abnormal Raphe nucleus morphology J:165266
Gbx2tm1.1Mrt/Gbx2tm1.1Mrt
(either: (involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * DBA/2J) or (involves: 129S1/Sv * 129X1/SvJ * FVB/N)) 		abnormal inferior colliculus morphology J:42110
abnormal locus ceruleus morphology J:42110
abnormal midbrain morphology J:42110
abnormal pons morphology J:42110
Gdf7tm2Tmj/Gdf7+
Tg(Hsp70-1-cre)6Arge/0
(involves: 129S1/Sv * C57BL/6J * CBA) 		decreased midbrain size J:60594
Gdnftm1Bbd/Gdnftm1Jlob
Tg(CAG-cre/Esr1*)5Amc/0
(involves: 129S1/Sv * C57BL/6 * CBA) 		abnormal locus ceruleus morphology J:139371
abnormal substantia nigra morphology J:139371
abnormal tegmentum morphology J:139371
Glb1tm1Adz/Glb1tm1Adz
(involves: 129/Sv * C57BL/6) 		abnormal brainstem morphology J:98543
Gli3tm1.1Alj/Gli3tm1.1Alj
(involves: 129S6/SvEvTac * C57BL/6) 		abnormal inferior colliculus morphology J:137136
abnormal midbrain morphology J:137136
abnormal superior colliculus morphology J:137136
enlarged cerebral aqueduct J:137136
enlarged tectum J:137136
Gli3tm1.1Alj/Gli3Xt
(involves: 101/H * 129S6/SvEvTac * C3H/HeH * C57BL/6 * CBA/H) 		abnormal inferior colliculus morphology J:137136
abnormal midbrain morphology J:137136
abnormal superior colliculus morphology J:137136
enlarged cerebral aqueduct J:137136
enlarged tectum J:137136
Gli3tm1Alj/Gli3tm1Alj
Tg(Nes-cre)1Kln/?
(involves: 129S6/SvEvTac * C57BL/6 * SJL) 		enlarged tectum J:137136
Gli3Xt/Gli3Xt
(involves: 101/H * C3H/HeH * C57BL/6 * CBA/H) 		abnormal inferior colliculus morphology J:137136
abnormal midbrain morphology J:137136
abnormal superior colliculus morphology J:137136
enlarged cerebral aqueduct J:137136
enlarged tectum J:137136
Gli3Xt/Gli3Xt
(involves: 101/H * C3H/HeH * CBA/H) 		abnormal medulla oblongata morphology J:5049
abnormal midbrain morphology J:5049
Gnl3tm2.1Rylt/Gnl3tm2.1Rylt
Tg(Nes-cre)1Kln/0
(involves: 129 * C57BL/6 * CBA) 		abnormal tectum morphology J:198698
decreased tegmentum size J:198698
Gpr37tm2Gtva/Gpr37tm2Gtva
(involves: 129P2/OlaHsd * C57BL/6J) 		abnormal substantia nigra morphology J:91390
Gpr161tm1.2Smuk/Gpr161tm1.2Smuk
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: C57BL/6J * CBA/J) 		abnormal midbrain morphology J:316181
enlarged cerebral aqueduct J:316181
enlarged tectum J:316181
increased midbrain size J:316181
Gpr161tm1.2Smuk/Gpr161tm1.2Smuk
Tg(Nes-cre)1Kln/0
(involves: C57BL/6 * C57BL/6J * SJL) 		enlarged tectum J:316181
Grid2Lc/Grid2+
(involves: STOCK MitfMi-wh) 		abnormal cochlear VIII nucleus morphology J:121314
Grid2Lc/Grid2Lc
(B6CBACa Aw-J/A-Grid2Lc/J) 		abnormal midbrain morphology J:39109
abnormal trigeminal motor nucleus morphology J:39109
Grin1tm1Stl/Grin1tm1Stl
(either: (involves: 129S2/SvPas * 129/Sv) or (involves: 129S2/SvPas * BALB/c) or (involves: 129S2/SvPas * C57BL/6)) 		abnormal brainstem morphology J:17384
Grin1tm2Slab/Grin1tm1.1Slab
(involves: 129P2/OlaHsd * C57BL/6J) 		abnormal brainstem morphology J:82670
Grntm1.1Hiok/Grn+
(involves: C57BL/6J) 		abnormal midbrain morphology J:308471
Gt(ROSA)26Sortm1(DTA)Jpmb/Gt(ROSA)26Sor+
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(either: (involves: 129S/SvEv * C57BL/6 * CBA) or (involves: 129S/SvEv * C57BL/6 * CBA * CD-1)) 		decreased midbrain size J:103417
Gt(ROSA)26Sortm1(GAP43/EGFP)Gld/Gt(ROSA)26Sor+
Ngfrtm1Klee/Ngfrtm1Klee
Tg(Pax6-cre,GFP)2Pgr/0
(involves: 129S1/Sv) 		abnormal superior colliculus morphology J:145459
H2az2Tg(Wnt1-cre)11Rth/H2az2+
Srsf3tm1Pjln/Srsf3tm1Pjln
(involves: BALB/c * C57BL/6J * CBA/J) 		decreased midbrain size J:308882
midbrain hypoplasia J:308882
Hdctm1Nagy/Hdc+
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal substantia nigra morphology J:220412
Hdctm1Nagy/Hdctm1Nagy
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal substantia nigra morphology J:220412
Hes1tm1Fgu/Hes1tm1Fgu
Hes3tm1Kag/Hes3tm1Kag
(involves: C57BL/6 * CBA * ICR) 		abnormal locus ceruleus morphology J:71074
abnormal midbrain morphology J:71074
abnormal oculomotor nucleus morphology J:71074
Hgstn/Hgstn
(B6.C3-Hgstn) 		abnormal medulla oblongata morphology J:5025
decreased midbrain size J:5025
decreased pons size J:5025
HhatTg(TFAP2A-cre)1Will/HhatTg(TFAP2A-cre)1Will
(Not Specified) 		abnormal midbrain morphology J:190013
Hipk2tm1Ejh/Hipk2tm1Ejh
(involves: 129X1/SvJ * C57BL/6) 		decreased substantia nigra size J:117465
decreased tegmentum size J:117465
Hnrnph2em1Jpat/Y
(C57BL/6J-Hnrnph2em1Jpat) 		abnormal cerebral aqueduct morphology J:338313
Hnrnph2em2Jpat/Hnrnph2+
(C57BL/6J-Hnrnph2em2Jpat) 		abnormal cerebral aqueduct morphology J:338313
Hoxa1tm1Ipc/Hoxa1tm1Ipc
(involves: 129S2/SvPas * C57BL/6) 		absent facial nuclei J:23837
Hoxa1tm1Mrc/Hoxa1tm1Mrc
(involves: 129S7/SvEvBrd * C57BL/6J) 		abnormal pons morphology J:1776
absent facial nuclei J:1776
absent superior olivary complex J:1776
small facial motor nucleus J:1776
Hoxa1tm5Mrc/Hoxa1+
Hoxb1tm5Mrc/Hoxb1tm5Mrc
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		small facial motor nucleus J:119279
Hoxa2tm1.1Fmr/Hoxa2tm1.1Fmr
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S2/SvPas * C57BL/6 * SJL) 		abnormal cochlear VIII nucleus morphology J:197162
Hoxa2tm1Ipc/Hoxa2tm1Ipc
(involves: 129S2/SvPas) 		abnormal facial motor nucleus morphology J:16388
Hoxb1tm1.1Mist/Hoxb1tm1.1Mist
(B6.129S2-Hoxb1tm1.1Mist/Cnrm) 		abnormal cochlear VIII nucleus morphology J:82809
abnormal facial motor nucleus morphology J:82809
Hoxb1tm1.1Mist/Hoxb1tm1.1Mist
Tg(Hoxb1-cre)r4Mist/0
Gt(ROSA)26Sortm1(EYFP)Cos/Gt(ROSA)26Sor+
(involves: 129S2/SvPas * 129X1/SvJ * C57BL/6 * CD-1) 		abnormal brainstem morphology J:197162
abnormal cochlear VIII nucleus morphology J:197162
abnormal pons morphology J:197162
Hoxb1tm1Mist/Hoxb1tm1Mist
Tg(Hoxb1-cre)r4Mist/0
Gt(ROSA)26Sortm1(EYFP)Cos/Gt(ROSA)26Sor+
(involves: 129S2/SvPas * 129X1/SvJ * C57BL/6 * CD-1) 		abnormal brainstem morphology J:197162
abnormal cochlear VIII nucleus morphology J:197162
abnormal pons morphology J:197162
Hoxb1tm1Mrc/Hoxb1tm1Mrc
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		absent facial nuclei J:36235
small facial motor nucleus J:36235
Hoxb1tm2Mrc/Hoxb1tm2Mrc
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		absent facial nuclei J:36235
small facial motor nucleus J:36235
Hoxb1tm5Mrc/Hoxb1tm5Mrc
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		absent facial nuclei J:119279
Hoxb2tm1Fmr/Hoxb2tm1Fmr
(involves: 129) 		absent facial nuclei J:54652
Hoxb2tm1Mrc/Hoxb2tm1Mrc
(involves: 129S1/Sv * 129X1/SvJ) 		absent facial nuclei J:37682
Hoxb2tm3.2Fmr/Hoxb2tm3.2Fmr
(involves: 129S2/SvPas * C57BL/6) 		abnormal brainstem morphology J:197162
abnormal cochlear VIII nucleus morphology J:197162
abnormal pons morphology J:197162
hpc/hpc
(involves: 129/Sv * C3H/He) 		abnormal inferior olivary complex morphology J:106373
Hsd11b1tm1Yko/Hsd11b1tm1Yko
(involves: 129P2/OlaHsd * MF1) 		abnormal brainstem morphology J:68825
Hsd17b7tm1Gibo/Hsd17b7tm1Gibo
(involves: 129S1/Sv * C57BL/6) 		decreased midbrain size J:140055
midbrain hypoplasia J:140055
Htttm1Mem/Htttm7Mem
(involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ * CD-1) 		abnormal cerebral aqueduct morphology J:44391
abnormal midbrain morphology J:44391
Htttm7Mem/Htttm7Mem
(involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ * CD-1) 		abnormal cerebral aqueduct morphology J:44391
abnormal midbrain morphology J:44391
enlarged cerebral aqueduct J:44391
hy1/hy1
(Not Specified) 		cerebral aqueductal stenosis J:12162
Hydinhy3/Hydinhy3
(involves: CBA) 		abnormal cerebral aqueduct morphology J:5377
Hydinhy3/Hydinhy3
(involves: FVB/N) 		abnormal brainstem morphology J:135322
Hyou1tm1Oga/Hyou1+
(involves: 129S1/Sv) 		abnormal substantia nigra pars compacta morphology J:117737
Idstm1Muen/Y
(involves: C57BL/6) 		abnormal brainstem morphology J:259752
Ift88cbbs/Ift88tm1.1Bky
(involves: 129P2/OlaHsd * 129S4/SvJae * C57BL/6) 		midbrain hyperplasia J:142500
Ift88fxo/Ift88fxo
(C3.B6J-Ift88fxo) 		abnormal midbrain morphology J:86437
Igf1rtm1Arge/Igf1rtm1Arge
(involves: 129S/SvEv) 		abnormal brainstem morphology J:15108
Il6tm1Mur/Il6tm1Mur
(B6.129P2(B6)-Il6tm1Mur) 		abnormal substantia nigra pars compacta morphology J:86039
Il17rdGt(KST223)Byg/Il17rd+
(B6.129P2-Il17rdGt(KST223)Byg) 		abnormal cochlear VIII nucleus morphology J:121107
Il17rdGt(KST223)Byg/Il17rdGt(KST223)Byg
(B6.129P2-Il17rdGt(KST223)Byg) 		abnormal cochlear VIII nucleus morphology J:121107
inad/inad
(C57BL/6-inad) 		abnormal medulla oblongata morphology J:97670
Inpp5etm1.1(KOMP)Vlcg/Inpp5etm1.1(KOMP)Vlcg
(C57BL/6N-Inpp5etm1.1(KOMP)Vlcg/MbpMmucd) 		abnormal midbrain morphology J:211773
Ireb2tm1.1Eal/Ireb2tm1.1Eal
(B6J.129-Ireb2tm1.1Eal) 		abnormal superior colliculus morphology J:217335
Ireb2tm1Roua/Ireb2tm1Roua
(involves: C57BL/6) 		abnormal corpora quadrigemina morphology J:67313
Kat2atm2Roth/Kat2atm2Roth
(involves: 129S7/SvEvBrd * C57BL/6J) 		abnormal midbrain morphology J:121357
Kat6bGt(pKC199)1Pgr/Kat6bGt(pKC199)1Pgr
(involves: 129S2/SvPas) 		decreased inferior colliculus size J:62161
KatnipGt(RRG309)Byg/KatnipGt(RRG309)Byg
(involves: 129P2/OlaHsd * C57BL/6) 		cerebral aqueductal stenosis J:239987
Kcnj6wv/Kcnj6+
(involves: C57BL/6J) 		abnormal substantia nigra pars compacta morphology J:38206
Kcnj6wv/Kcnj6wv
(B6CBACa Aw-J/A-Kcnj6wv/J) 		abnormal substantia nigra pars compacta morphology J:6717
Kcnj6wv/Kcnj6wv
(involves: C57BL/6) 		abnormal cochlear VIII nucleus morphology J:121314
Kcnk5Gt(KST024)Byg/Kcnk5+
Phox2btm2Jbr/Phox2b+
(involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6) 		abnormal retrotrapezoid nucleus morphology J:157526
Kcnq2tm1.1Lvi/Kcnq2+
(129-Kcnq2tm1.1Lvi/Lvi) 		increased superior colliculus size J:298666
Kdm2btm1Nobu/Kdm2btm1Nobu
(either: (involves: 129S/SvEv * 129P2/OlaHsd) or (involves: 129P2/OlaHsd * C57BL/6J)) 		absent cerebral aqueduct J:171291
increased midbrain size J:171291
Kdm6bGt(XB814)Byg/Kdm6bGt(XB814)Byg
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal pre-Botzinger complex morphology J:196346
Kif1btm1Noh/Kif1btm1Noh
(involves: 129S4/SvJae * C57BL/6J) 		abnormal brainstem morphology J:69772
Kif2atm1Noh/Kif2atm1Noh
(involves: 129S4/SvJae * C57BL/6J) 		abnormal inferior olivary complex morphology J:107737
abnormal midbrain morphology J:107737
abnormal pons morphology J:107737
abnormal pontine nuclei morphology J:107737
abnormal tegmentum morphology J:107737
abnormal trigeminal V mesencephalic nucleus morphology J:107737
L1camtm1(tTA)Msch/Y
(involves: 129 * C57BL/6J) 		abnormal cerebral aqueduct morphology J:107878
L1camtm1Mtei/Y
(involves: 129 * C57BL/6J) 		abnormal cerebral aqueduct morphology J:107878
L1camtm1Sor/Y
(involves: 129S7/SvEvBrd) 		abnormal cerebral aqueduct morphology J:47995
Laptm4btm1e.1(KOMP)Wtsi/Laptm4btm1e.1(KOMP)Wtsi
(C57BL/6N-Laptm4btm1e.1(KOMP)Wtsi/Tcp) 		abnormal midbrain morphology J:211773
Lbx1tm2Cbm/Lbx1tm3.1(cre)Cbm
Mapttm2Arbr/Mapt+
(involves: 129P2/OlaHsd) 		abnormal brainstem morphology J:121332
abnormal medulla oblongata morphology J:121332
Lef1tm1Rug/Lef1tm1Rug
(involves: 129S2/SvPas * C57BL/6) 		absent mesencephalic trigeminal nucleus J:18378
Lemd2Gt(DD0639)Wtsi/Lemd2Gt(DD0639)Wtsi
(B6.129P2-Lemd2Gt(DD0639)Wtsi) 		abnormal midbrain morphology J:221495
Lhx1tm1Bhr/Lhx1tm1Bhr
(involves: 129S7/SvEvBrd * C57BL/6) 		absent midbrain J:24115
Lhx1tm3.1Bhr/Lhx1tm3.1Bhr
(involves: 129S7/SvEvBrd * C57BL/6) 		absent midbrain J:63192
Lig4tm1Fwa/Lig4tm1Fwa
(involves: 129S6/SvEvTac) 		abnormal brainstem morphology J:110848
Lmnb1tm2Sgy/Lmnb1tm2Sgy
(involves: 129P2/OlaHsd * C57BL/6) 		decreased midbrain size J:197315
Lmx1btm1Rjo/Lmx1btm1Rjo
(involves: 129S7/SvEvBrd) 		abnormal pretectal region morphology J:117035
abnormal superior colliculus morphology J:117035
abnormal tectum morphology J:117035
decreased superior colliculus size J:117035
small tectum J:117035
Lmx1btm1Rjo/Lmx1btm1Zfc
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S7/SvEvBrd * C57BL/6 * CBA) 		small tectum J:117035
Lmx1btm1Zfc/Lmx1btm1Zfc
Tg(Fev-cre)1Esd/0
(involves: 129S7/SvEvBrd * C57BL/6 * SJL) 		abnormal Raphe nucleus morphology J:139720, J:116706
Lpoem1Zlu/Lpoem1Zlu
(involves: C57BL/6 * SJL) 		abnormal medulla oblongata morphology J:307289
Lrp6Gt(Ex187)Byg/Lrp6Gt(Ex187)Byg
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal midbrain morphology J:64989
absent inferior colliculus J:64989
Luzp1tm1Acch/Luzp1tm1Acch
(B6.129P2-Luzp1tm1Acch) 		abnormal pons morphology J:141306
m357Asp/m357Asp
Tg(Rr291-lacZ)#Mekk/0
(involves: C57BL/6J * FVB/N) 		midbrain hyperplasia J:136795
Mafbtm1Mhs/Mafbtm1Mhs
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal brainstem morphology J:85746
Magee2em1(IMPC)Wtsi/Y
(C57BL/6N-Magee2em1(IMPC)Wtsi) 		increased pons size J:324106
increased superior colliculus size J:324106
Man2b1tm1Psa/Man2b1tm1Psa
(involves: 129 * C57BL/6J) 		abnormal brainstem morphology J:56659, J:99812
Map1btm1Noh/Map1btm1Noh
Map2tm1Noh/Map2tm1Noh
(involves: C57BL/6) 		abnormal inferior olivary complex morphology J:71900
Mfn2tm1.1Arte/Mfn2tm1.1Arte
Slc6a3tm1(cre)Lrsn/Slc6a3+
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal substantia nigra pars compacta morphology J:188337
Mid1tm1Mero/Y
(B6.Cg-Mid1tm1Mero) 		abnormal tectum morphology J:157828
decreased inferior colliculus size J:157828
Mir9-2tm1Sia/Mir9-2tm1Sia
Mir9-3tm1Sia/Mir9-3tm1Sia
(involves: C57BL/6 * CBA) 		abnormal inferior colliculus morphology J:170671
Mks1tm1a(EUCOMM)Wtsi/Mks1tm1a(EUCOMM)Wtsi
(involves: C57BL/6 * C57BL/6N) 		abnormal cerebral aqueduct morphology J:196290
Morc2atm1.1Pngr/Morc2atm1.1Pngr
Mphosph8tm1c(EUCOMM)Wtsi/Mphosph8tm1c(EUCOMM)Wtsi
Tg(Nes-cre)1Kln/0
(involves: 129P2/OlaHsd * C57BL/6N * SJL) 		abnormal corpora quadrigemina morphology J:332344
Morc2atm1.1Pngr/Morc2atm1.1Pngr
Tg(Nes-cre)1Kln/0
(involves: 129P2/OlaHsd * C57BL/6 * SJL) 		abnormal corpora quadrigemina morphology J:332344
increased midbrain size J:332344
Mphosph8tm1c(EUCOMM)Wtsi/Mphosph8tm1c(EUCOMM)Wtsi
Tg(Nes-cre)1Kln/0
(involves: C57BL/6N * SJL) 		abnormal corpora quadrigemina morphology J:332344
Mptp1C57BL/6J/Mptp1C57BL/6J
(involves: C57BL/6J * Swiss Webster) 		abnormal substantia nigra morphology J:82236
Mptp1C57BL/6J/Mptp1Swiss Webster
(involves: C57BL/6J * Swiss Webster) 		abnormal substantia nigra morphology J:82236
Mptp1Swiss Webster/Mptp1Swiss Webster
(involves: C57BL/6J * Swiss Webster) 		abnormal substantia nigra morphology J:82236
Mtorflat/Mtorflat
(involves: BTBR/J * C57BL/6J) 		abnormal midbrain morphology J:53291
Mycbp2tm1.1Adia/Mycbp2tm1.1Adia
(involves: C57BL/6 * FVB/N) 		abnormal midbrain morphology J:125702
Mycntm1Par/Mycntm1Par
(involves: 129S2/SvPas * C57BL/6J) 		abnormal medulla oblongata morphology J:3432
Myh10tm4Rsad/Myh10tm4Rsad
(involves: 129S6/SvEvTac * C57BL/6) 		abnormal cerebral aqueduct morphology J:168304
Myo9atm1.2Bah/Myo9atm1.2Bah
(involves: C57BL/6 * SJL) 		abnormal cerebral aqueduct morphology J:251454
Myo9atm1.2Bah/Myo9atm1.2Bah
Rhobtm1Gcp/Rhobtm1Gcp
(involves: 129/Sv * C57BL/6 * SJL) 		abnormal cerebral aqueduct morphology J:251454
Naglutm1Efn/Naglutm1Efn
(either: (involves: 129S/SvEv * C57BL/6) or (involves: C57BL/6)) 		abnormal midbrain morphology J:58950
abnormal pons morphology J:58950
Napahyh/Napahyh
(either: C57BL/10J or (C57BL/6J x C3HeB/FeJ-a/a)F1) 		abnormal cerebral aqueduct morphology J:86347
abnormal midbrain morphology J:86347
Ndst1tm1.1Grob/Ndst1tm1.1Grob
Shhtm1Chg/Shh+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal midbrain morphology J:100425
Ndufs4tm1.1Rpa/Ndufs4tm1.1Rpa
(B6.129S4-Ndufs4tm1.1Rpa) 		abnormal medulla oblongata morphology J:190475
Ndufs4tm1Rpa/Ndufs4tm1Rpa
Tg(Nes-cre)1Kln/0
(B6.Cg-Tg(Nes-cre)1Kln Ndufs4tm1Rpa) 		abnormal medulla oblongata morphology J:190475
Nefltm2.1Liem/Nefl+
(B6.Cg-Nefltm2.1Liem) 		abnormal pons morphology J:220605
Nek1kat-2J/Nek1kat-2J
(C57BL/6J-Nek1kat-2J/J) 		abnormal cerebral aqueduct morphology J:37799
Nek1kat/Nek1kat
(involves: C3HeB/FeJLe * C57BL/6J * RBF/Dn) 		abnormal cerebral aqueduct morphology J:37799
Nf1tm1Tyj/Nf1tm1Tyj
Rasa1tm1Paw/Rasa1tm1Paw
(either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6) or (involves: 129S1/Sv * 129X1/SvJ * CD-1)) 		absent midbrain J:29825
Nfibtm1Rmg/Nfibtm1Rmg
(involves: 129P2/OlaHsd * Black Swiss) 		abnormal pons morphology J:96006
Nfibtm1Rmg/Nfibtm1Rmg
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal pons morphology J:96006
Ngfrtm1Jae/Ngfrtm1Jae
(involves: 129S4/SvJae) 		abnormal superior colliculus morphology J:145459
Ngfrtm1Jae/Ngfrtm1Jae
(involves: 129S1/Sv * 129S4/SvJae) 		abnormal superior colliculus morphology J:145459
Nkx6-2tm2(cre)Ercs/Nkx6-2+
Rettm1.1Pern/Rettm1.1Pern
(involves: 129P2/OlaHsd * C57BL/6 * SJL) 		abnormal facial motor nucleus morphology J:131770
abnormal hypoglossal nucleus morphology J:131770
Nmnat2Tn(sb-Tyr)2172.P9KK4BOve/Nmnat2Tn(sb-Tyr)2172.P9KK4BOve
(involves: FVB/N) 		abnormal facial motor nucleus morphology J:192196
NodalTgR(MPSVNeo)413.dRob/Nodaltm4Rob
(involves: 129S/SvEv * C57BL/6) 		absent midbrain J:84300
Npas3tm1Ewb/Npas3tm1Ewb
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		enlarged cerebral aqueduct J:101561
Npc1m1N/Npc1m1N
(BALB/cNctr-Npc1m1N/J) 		abnormal pons morphology J:149812
Nr1h2tm1.1Gstr/Nr1h2tm1.1Gstr
Nr1h3tm1.1Gstr/Nr1h3tm1.1Gstr
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal cerebral aqueduct morphology J:81790
abnormal substantia nigra pars reticulata morphology J:81790
Nr4a2tm1Omc/Nr4a2tm1Omc
(involves: 129S7/SvEvBrd * C57BL/6) 		abnormal substantia nigra morphology J:46856
abnormal tegmentum morphology J:46856
Nrp1tm1Hfu/Nrp1tm1Hfu
(involves: CD-1 * JF1) 		abnormal facial motor nucleus morphology J:94050
Ntf3tm1Jae/Ntf3tm1Jae
(involves: 129S4/SvJae * BALB/c) 		small mesencephalic trigeminal nucleus J:23882
Ntf3tm1Lfr/Ntf3tm1Lfr
(involves: 129S2/SvPas) 		small mesencephalic trigeminal nucleus J:18984
Ntn1Gt(ST629)Byg/Ntn1Gt(ST629)Byg
(involves: 129P2/OlaHsd * CD-1) 		abnormal pontine nuclei morphology J:37125
Ntn1Gt(ST629)Byg/Ntn1Gt(ST629)Byg
(involves: 129P2/OlaHsd * C57BL/6J) 		abnormal pyramidal decussation morphology J:80430
Ntrk2tm1Bbd/Ntrk2tm1Bbd
(involves: 129S2/SvPas * C57BL/6) 		small facial motor nucleus J:56847
oh/oh
(Not Specified) 		cerebral aqueductal stenosis J:5300
Olig3tm1Qiu/Olig3tm1Qiu
(Not Specified) 		abnormal inferior olivary complex morphology J:143462
Opn4tm1.1(cre)Saha/Opn4+
Pou4f2tm4(DTA)Whk/Pou4f2+
Tg(CAG-Bgeo/ALPP)1Lbe/0
(involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal olivary pretectal nucleus morphology J:174940
Opn4tm1.1(cre)Saha/Opn4tm1Yau
Pou4f2tm4(DTA)Whk/Pou4f2+
(involves: 129S/SvEv * C57BL/6) 		abnormal olivary pretectal nucleus morphology J:174940
Otofdeaf5Jcs/Otofdeaf5Jcs
(STOCK Otofdeaf5Jcs/Kjn) 		decreased cochlear VIII nucleus size J:269136
Otx1tm1Asim/Otx1tm1Asim
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		abnormal midbrain morphology J:35640
increased inferior colliculus size J:35640
increased superior colliculus size J:35640
Otx1tm1Asim/Otx1tm2(otd)Asim
Otx2tm1Pas/Otx2+
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		abnormal midbrain morphology J:47899
Otx1tm1Sia/Otx1+
Otx2tm1Sia/Otx2+
(involves: C57BL/6 * CBA) 		abnormal inferior colliculus morphology J:73592
abnormal midbrain morphology J:51989, J:73592
abnormal oculomotor nucleus morphology J:73592
abnormal pretectal region morphology J:51989
abnormal red nucleus morphology J:73592
abnormal superior colliculus morphology J:73592
abnormal tegmentum morphology J:73592
abnormal trigeminal V mesencephalic nucleus morphology J:73592
decreased midbrain size J:73592
decreased substantia nigra size J:73592
enlarged cerebral aqueduct J:73592
increased pons size J:51989
Otx1tm1Sia/Otx1+
Otx2tm2(Otx1)Sia/Otx2+
(involves: C57BL/6 * CBA) 		decreased midbrain size J:51989
Otx1tm1Sia/Otx1tm1Sia
(involves: C57BL/6 * CBA) 		abnormal trigeminal V mesencephalic nucleus morphology J:73592
Otx1tm1Sia/Otx1tm1Sia
Otx2tm5Sia/Otx2tm5Sia
(involves: C57BL/6NCrlj * CBA/JNCrlj) 		absent midbrain J:91011
Otx1tm1Sia/Otx1tm1Sia
Otx2tm8.2Sia/Otx2tm8.2Sia
(involves: C57BL/6 * CBA) 		absent midbrain J:166617
absent tectum J:166617
absent tegmentum J:166617
increased pons size J:166617
Otx1tm2(otd)Asim/Otx1tm2(otd)Asim
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		abnormal midbrain morphology J:47899
decreased inferior colliculus size J:47899
decreased superior colliculus size J:47899
Otx1tm2(otd)Asim/Otx1tm2(otd)Asim
Otx2tm1Pas/Otx2+
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		abnormal midbrain morphology J:47899
Otx1tm3(OTX2)Asim/Otx1tm3(OTX2)Asim
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		decreased midbrain size J:52989
Otx1tm4(cre)Asim/Otx1+
Otx2tm6Asim/Otx2tm6.1Asim
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * DBA/2) 		abnormal tegmentum morphology J:83110
small tectum J:83110
Otx2tm1.1Tlam/Otx2tm2(cre/ERT2)Tlam
(129/Sv) 		abnormal inferior colliculus morphology J:116888
abnormal midbrain morphology J:116888
decreased inferior colliculus size J:116888
Otx2tm1Pas/Otx2tm1Pas
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		absent midbrain J:29276
Otx2tm1Sia/Otx2+
(involves: C57BL/6 * CBA) 		abnormal inferior colliculus morphology J:29682
abnormal trigeminal V mesencephalic nucleus morphology J:29682
absent midbrain J:29682
Otx2tm1Sia/Otx2tm1Sia
(involves: C57BL/6 * CBA) 		absent midbrain J:29682
Otx2tm1Sia/Otx2tm4Sia
(involves: C57BL/6 * CBA) 		abnormal midbrain morphology J:74631
Otx2tm1Sia/Otx2tm5Sia
(involves: C57BL/6NCrlj * CBA/JNCrlj) 		absent midbrain J:91011
Otx2tm1Sla/Otx2tm1Sla
(involves: 129S1/Sv * 129X1/SvJ * CD-1) 		absent midbrain J:30828
Otx2tm1Sla/Otx2tm2Sla
(involves: 129S1/Sv * 129X1/SvJ * CD-1) 		absent midbrain J:46641
Otx2tm2.1Imat/Otx2tm7Sia
(involves: C57BL/6NCrlj * CBA/JNCrlj) 		absent midbrain J:91012
Otx2tm2Asim/Otx2tm2Asim
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		decreased midbrain size J:71034
Otx2tm3(Emx2)Sia/Otx2+
(involves: C57BL/6 * CBA) 		abnormal pretectal region morphology J:70745
Otx2tm3Tlam/Otx2tm3Tlam
(129/Sv-Otx2tm3Tlam) 		abnormal midbrain morphology J:130649
Otx2tm12.1Asim/Otx2tm11Asim
(involves: 129P2/OlaHsd * C57BL/6 * DBA/2) 		midbrain hypoplasia J:207121
Pak1ip1mray/Pak1ip1mray
(involves: C57BL/6J * FVB/NJ) 		increased midbrain size J:204457
Park7tm1Dsp/Park7tm1Dsp
(B6.129P2-Park7tm1Dsp) 		abnormal locus ceruleus morphology J:190315
abnormal substantia nigra pars compacta morphology J:190315
Pax21Neu/Pax21Neu
(involves: 102 * C3H) 		abnormal corpora quadrigemina morphology J:37055
abnormal midbrain morphology J:37055
Pax2tm1Mbu/Pax2tm1Mbu
(C3.129P2-Pax2tm1Mbu) 		abnormal midbrain morphology J:63683
absent tectum J:63683
Pax3tm1Mrc/Pax3+
Tg(CMV-cre)1Cgn/?
(involves: 129S1/Sv * 129X1/SvJ * BALB/cJ * C57BL/6) 		midbrain hyperplasia J:93443
Pax5tm1Mbu/Pax5tm1Mbu
(involves: 129S2/SvPas * C57BL/6) 		decreased inferior colliculus size J:113076
Pax6Sey/Pax6Sey
(Not Specified) 		abnormal pretectal region morphology J:98539
Pcdhatm3Tyag/Pcdhatm3Tyag
(B6.Cg-Pcdhatm3Tyag) 		abnormal substantia nigra morphology J:151979
Pdss2tm1.1Jdhu/Pdss2tm1.2Jdhu
Tg(Pax2-cre)1Akg/0
(involves: 129 * C57BL/6N * FVB/N) 		decreased midbrain size J:179845
midbrain hypoplasia J:179845
Pdzd8tm1b(EUCOMM)Wtsi/Pdzd8tm1b(EUCOMM)Wtsi
(C57BL/6N-Pdzd8tm1b(EUCOMM)Wtsi) 		decreased superior colliculus size J:317428
Pelotm1Slac/Pelotm1Slac
En1tm2(cre)Wrst/En1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		decreased inferior colliculus size J:306384
decreased superior colliculus size J:306384
Phox2atm1.1Sgu/Phox2atm1.1Sgu
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal locus ceruleus morphology J:63720
Phox2atm1Jbr/Phox2atm1Jbr
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal locus ceruleus morphology J:39084
Phox2btm1(Phox2a)Mist/Phox2btm1(Phox2a)Mist
(involves: 129S4/SvJae) 		abnormal locus ceruleus morphology J:126634
small facial motor nucleus J:126634
Phox2btm1.1Heno/Phox2b+
(either: (involves: 129P2/OlaHsd * C57BL/6) or (involves: 129P2/OlaHsd * C57BL/6 * DBA/2)) 		abnormal retrotrapezoid nucleus morphology J:190742
small facial motor nucleus J:190742
Phox2btm1Jbr/Phox2btm1Jbr
(Not Specified) 		abnormal locus ceruleus morphology J:63723
abnormal medulla oblongata morphology J:86516
Phox2btm1Rth/Phox2b+
Hprt1tm1(CAG-cre)Mnn/?
(involves: 129 * 129S1/Sv * C57BL/6) 		abnormal locus ceruleus morphology J:331513
abnormal trigeminal V mesencephalic nucleus morphology J:331513
Phox2btm1Rth/Phox2b+
Tg(Fabp7-cre,-lacZ)3Gtm/0
(involves: 129 * C57BL/6 * CBA) 		abnormal retrotrapezoid nucleus morphology J:331513
Phox2btm2.1Heno/Phox2b+
(either: (involves: 129P2/OlaHsd * C57BL/6) or (involves: 129P2/OlaHsd * C57BL/6 * DBA/2)) 		abnormal retrotrapezoid nucleus morphology J:190742
Phox2btm4Jbr/Phox2b+
Tg(Pgk1-cre)1Lni/0
(involves: 129S2/SvPas * BALB/c * C57BL/6 * DBA/2) 		abnormal retrotrapezoid nucleus morphology J:176573
Pignm1Nisw/Pignm1Nisw
(involves: 129S1/SvImJ * C3H/HeJ * C57BL/6J) 		midbrain hypoplasia J:187360
PikfyveGt(AT0926)Wtsi/PikfyveGt(AT0926)Wtsi
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal brainstem morphology J:190368
abnormal midbrain morphology J:190368
abnormal pons morphology J:190368
PitpnaGt(OST1152)Lex/PitpnaGt(OST1152)Lex
(involves: 129S5/SvEvBrd) 		abnormal brainstem morphology J:85204
Pitpnatm1Vab/Pitpnatm1Vab
(involves: 129S7/SvEvBrd) 		abnormal brainstem morphology J:85204
Pitx3ak/Pitx3ak
(either: (involves: 129/Sv * C57BLKS) or (involves: 129/Sv * C57BL/6)) 		abnormal midbrain morphology J:82907, J:82746
decreased substantia nigra size J:82746
Pitx3ak/Pitx3ak
(involves: 129S1/Sv * C57BL/6 * C57BLKS/J) 		abnormal substantia nigra pars compacta morphology J:109319
Pla2g6m1Sein/Pla2g6m1Sein
(C57BL/6JJcl-Pla2g6m1Sein) 		abnormal brainstem morphology J:153195
Pla2g6tm1.1Hlw/Pla2g6tm1.1Hlw
(involves: 129 * C57BL/6J) 		abnormal substantia nigra pars compacta morphology J:317126
Pomgnt1tm1.1Cfg/Pomgnt1tm1.1Cfg
(involves: C57BL/6) 		abnormal inferior colliculus morphology J:258757
abnormal superior colliculus morphology J:258757
Pou4f1tm1Nat/Pou4f1tm1Nat
(involves: 129S7/SvEvBrd * C57BL/6J) 		abnormal medulla oblongata morphology J:35877
abnormal red nucleus morphology J:35877
Pou4f1tm1Rsd/Pou4f1tm1Rsd
(involves: 129S4/SvJae) 		abnormal inferior olivary complex morphology J:37118
absent red nucleus J:37118
Pou4f2tm1Nat/Pou4f2tm2.1Nat
Tg(Pax6-cre,GFP)2Pgr/?
(involves: 129S7/SvEvBrd) 		abnormal superior colliculus morphology J:147350
Pou4f2tm1Rsd/Pou4f2tm1Rsd
(involves: 129S4/SvJae) 		abnormal superior colliculus morphology J:33502
Ppargc1atm1Dpk/Ppargc1atm1Dpk
(involves: 129X1/SvJ * C57BL/6) 		abnormal brainstem morphology J:96306
Ppargc1atm1Dpk/Ppargc1atm1Dpk
(B6.129X1-Ppargc1atm1Dpk/J) 		abnormal substantia nigra morphology J:298664
Prkdcscid/Prkdcscid
Iduatm1Clk/Iduatm1Clk
(NOD.Cg-Prkdcscid Iduatm1Clk/J) 		abnormal brainstem morphology J:139626
Prkntm1Roo/Prkntm1Roo
(involves: 129S2/SvPas) 		decreased substantia nigra size J:125148
Prkntm1Tmd/Prkntm1Tmd
(involves: C57BL/6) 		abnormal locus ceruleus morphology J:91487
Prkntm1Ykt/Prkntm1Ykt
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal substantia nigra pars compacta morphology J:117737
Psaptm1Juma/Psaptm1Juma
(FVB.129S-Psaptm1Juma) 		abnormal brainstem morphology J:121761
Psaptm2Suz/Psaptm2Suz
(involves: 129S/SvEv * C57BL/6J) 		abnormal brainstem morphology J:78223
Psphtm1a(EUCOMM)Hmgu/Psphtm1a(EUCOMM)Hmgu
(C57BL/6N-Psphtm1a(EUCOMM)Hmgu/Wtsi) 		abnormal midbrain morphology J:239583
Ptentm1Hwu/Ptentm1Hwu
Slc6a3tm1.1(cre)Bkmn/Slc6a3+
(involves: 129S4/SvJae * C57BL/6) 		abnormal midbrain morphology J:153622
abnormal substantia nigra pars compacta morphology J:153622
abnormal substantia nigra pars reticulata morphology J:153622
Ptentm1Hwu/Ptentm1Hwu
Tg(Nes-cre)1Atp/0
(involves: 129S4/SvJae * FVB/N) 		abnormal brainstem morphology J:73255
Pygo2tm1b(EUCOMM)Wtsi/Pygo2tm1b(EUCOMM)Wtsi
(C57BL/6N-Pygo2tm1b(EUCOMM)Wtsi/Tcp) 		abnormal midbrain morphology J:211773
Ranbp1tm1b(KOMP)Wtsi/Ranbp1tm1b(KOMP)Wtsi
(C57BL/6N-Ranbp1tm1b(KOMP)Wtsi/Tcp) 		abnormal midbrain morphology J:211773
Rap1gds1tm1Ytk/Rap1gds1tm1Ytk
(involves: 129X1/SvJ * C57BL/6 * DBA) 		abnormal medulla oblongata morphology J:62244
Raxtm1Mjam/Raxtm1Mjam
(Not Specified) 		decreased midbrain size J:40830
Rfx4Tg(Myh6-CYP2J2)Tr5Dcz/Rfx4+
(involves: C57BL/6NTac) 		cerebral aqueductal stenosis J:84751
Rhoatm1Yuyo/Rhoatm1Yuyo
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: C57BL/6J * CBA/J) 		abnormal midbrain morphology J:172044
increased midbrain size J:172044
Rhot1tm1.1Jmsu/Rhot1tm1.1Jmsu
Tg(Eno2-cre)39Jme/0
(involves: 129 * C57BL/6 * C57BL/6J * SJL) 		abnormal brainstem morphology J:216408
Rhot1tm1.2Jmsu/Rhot1tm1.2Jmsu
(involves: 129 * 129S1/Sv * C57BL/6 * SJL) 		abnormal brainstem morphology J:216408
Rnd3Gt(IST12405G10)Tigm/Rnd3Gt(IST12405G10)Tigm
(involves: C57BL/6N) 		abnormal cerebral aqueduct morphology J:197325
cerebral aqueductal stenosis J:197325
Rnf180tm1.1Jaru/Rnf180tm1.1Jaru
(B6J.129P2(Cg)-Rnf180tm1.1Jaru) 		abnormal locus ceruleus morphology J:199865
Robo3tm1Matl/Robo3tm1Matl
Tg(Mnx1-EGFP)#Tmj/0
(involves: C57BL/6 * DBA) 		abnormal pons morphology J:158918
Rorasg/Rora+
(involves: C57BL) 		abnormal inferior olivary complex morphology J:1431
Rorasg/Rorasg
(involves: obese stock) 		abnormal cochlear VIII nucleus morphology J:121314
Rorasg/Rorasg
(involves: C57BL/6) 		abnormal inferior olivary complex morphology J:28468, J:20982
Rpgrip1ltm1a(EUCOMM)Wtsi/Rpgrip1ltm1a(EUCOMM)Wtsi
(C57BL/6N-Rpgrip1ltm1a(EUCOMM)Wtsi/Wtsi) 		abnormal midbrain morphology J:239583
Scn2atm1Mml/Scn2atm1Mml
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		abnormal brainstem morphology J:76457
Scribtm1b(NCOM)Mfgc/Scribtm1b(NCOM)Mfgc
(C57BL/6N-Scribtm1a(NCOM)Mfgc/Tcp) 		abnormal midbrain morphology J:211773
Scube1tm1Rbya/Scube1tm1Rbya
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal medulla oblongata morphology J:136534
Shhtm1Chg/Shhtm1Chg
(involves: 129S1/Sv * 129X1/SvJ) 		decreased midbrain size J:35802
Shhtm2Chg/Shh+
Edil3Tg(Sox2-cre)1Amc/Edil3+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * CBA) 		increased midbrain size J:125109
Six3tm1Gco/Six3tm1Gco
(involves: 129S1/Sv) 		increased midbrain size J:81797
Slc6a3tm2(tTA)Xz/Slc6a3+
Tg(tetO-COX8A/PstI*)1Ctm/0
(involves: 129X1/SvJ * C57BL/6 * C57BL/6J * SJL) 		abnormal substantia nigra morphology J:178139
Slc17a5tm1Lex/Slc17a5tm1Lex
(involves: 129S5/SvEvBrd * C57BL/6) 		abnormal brainstem morphology J:158444
Smad1tm1Rjle/Smad1+
(involves: 129S6/SvEvTac * NIH Black Swiss) 		abnormal midbrain morphology J:99098
Smad2tm1Rob/Smad2tm2Rob
Edil3Tg(Sox2-cre)1Amc/Edil3+
(involves: 129S/SvEv * C57BL/6 * CBA * CD-1) 		absent midbrain J:84300
Smad9tm1Mwst/Smad9tm1Mwst
(involves: 129S6/SvEvTac * NIH Black Swiss) 		abnormal midbrain morphology J:99098
Smarcb1em1Koke/Smarcb1em1Koke
(C57BL/6-Smarcb1em1Koke) 		cerebral aqueductal stenosis J:337790
Smg9em1(IMPC)J/Smg9em1(IMPC)J
(involves: C57BL/6NJ) 		decreased midbrain size J:231968
Smpd1tm1Esc/Smpd1tm1Esc
(involves: 129S1/Sv * C57BL/6J) 		midbrain atrophy J:26732
Snx3tm1.1(KOMP)Vlcg/Snx3tm1.1(KOMP)Vlcg
(C57BL/6N-Snx3tm1.1(KOMP)Vlcg/J) 		abnormal midbrain morphology J:211773
Sod2tm1Cje/Sod2+
Tg(SOD1*G93A)1Gur/0
(involves: C57BL/6 * CD-1 * SJL) 		decreased substantia nigra size J:62381
Sod2tm1Cje/Sod2tm1Cje
(involves: C57BL/6J) 		abnormal brainstem morphology J:45913
Sod2tm1Cje/Sod2tm1Cje
(involves: C57BL/6J * DBA/2J) 		abnormal brainstem morphology J:98007
abnormal trigeminal motor nucleus morphology J:98007
abnormal trigeminal V mesencephalic nucleus morphology J:98007
Sos1tm1Dlb/Sos1tm1Dlb
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		abnormal midbrain morphology J:38321
Sos1tm1Dlb/Sos1tm1Dlb
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal midbrain morphology J:38321
Spp1tm1Blh/Spp1tm1Blh
(B6.129S6-Spp1tm1Blh) 		abnormal substantia nigra morphology J:118432
Sptan1Gt(RRQ171)Byg/Sptan1Gt(RRQ171)Byg
(B6.129P2-Sptan1Gt(RRQ171)Byg) 		cerebral aqueductal stenosis J:186305
Ssbp3Gt(XB276)Byg/Ssbp3Gt(XB276)Byg
(involves: 129P2/OlaHsd) 		absent midbrain J:111801
decreased midbrain size J:111801
st/st
(Not Specified) 		abnormal midbrain roof plate morphology J:15089
StrbpGt(pGT1.8geo)8Pgr/StrbpGt(pGT1.8geo)8Pgr
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		abnormal superior colliculus morphology J:69466
Suz12tm1Xmir/Suz12+
(Not Specified) 		enlarged tectum J:150128
increased inferior colliculus size J:150128
increased superior colliculus size J:150128
Svbpem1Mjom/Svbpem1Mjom
(C57BL/6-Svbpem1Mjom) 		abnormal brainstem morphology J:325763
Tal2tm1Thr/Tal2tm1Thr
(involves: 129 * C57BL/6) 		abnormal inferior colliculus morphology J:65762
abnormal superior colliculus morphology J:65762
abnormal tectum morphology J:65762
decreased superior colliculus size J:65762
Tenm2tm1Cal/Tenm2tm1Cal
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6) 		abnormal superior colliculus morphology J:199791
Tfap2dtm1Mos/Tfap2dtm1Mos
(Not Specified) 		absent inferior colliculus J:177585
Tg(CAG-DPP4)52Ctkt/0
(involves: C3H/HeJ * C57BL/6J) 		abnormal brainstem morphology J:227925
Tg(Camk2a-tTA)1Mmay/0
Tg(tetO-SNCA)0Olri/0
(involves: C57BL/6) 		abnormal substantia nigra morphology J:132774
abnormal substantia nigra pars reticulata morphology J:132774
Tg(CMV-ATXN3*135Q)CPama/0
(C57BL/6-Tg(CMV-ATXN3*135Q)CPama) 		abnormal pontine nuclei morphology J:222991
abnormal substantia nigra morphology J:222991
decreased pontine nuclei size J:222991
Tg(DBH-SNCA)#Dwei/0
(C57BL/6N-Tg(DBH-SNCA)#Dwei) 		abnormal locus ceruleus morphology J:296218
Tg(Gfap-TGFB1)64Lms/Tg(Gfap-TGFB1)64Lms
(involves: BALB/c * SJL) 		enlarged cerebral aqueduct J:27781
Tg(GFAP-tTA)6Hyms/0
Tg(tetO-HMOX1)6Hyms/0
(involves: FVB/N) 		abnormal substantia nigra morphology J:186620
Tg(Pcp2-TBP*)69Hmhl/0
(involves: FVB/N) 		abnormal brainstem morphology J:174239
Tg(PDGFB-LRRK2*G2019S)32Hlw/?
(FVB/N-Tg(PDGFB-LRRK2*G2019S)32Hlw) 		abnormal substantia nigra pars compacta morphology J:204793
Tg(Prnp-CCS)17Jlel/?
Tg(SOD1*G93A)dl1Gur/?
(involves: C57BL/6 * SJL) 		abnormal hypoglossal nucleus morphology J:120361
Tg(Prnp-TARDBP)3cPtrc/Tg(Prnp-TARDBP)3cPtrc
(C57BL/6-Tg(Prnp-TARDBP)3cPtrc) 		abnormal brainstem morphology J:163231
abnormal red nucleus morphology J:163231
Tg(Prnp-TARDBP*A315T)23Jlel/0
(involves: C57BL/6 * CD-1 * SJL) 		abnormal brainstem morphology J:165985
Tg(Slc6a3-PARK2*Q311X)AXwy/0
(FVB/NJ-Tg(Slc6a3-PARK2*Q311X)AXwy) 		abnormal substantia nigra morphology J:146833
Tg(Sod1*G86R)M1Jwg/0
(involves: FVB/N) 		abnormal facial motor nucleus morphology J:58733
abnormal hypoglossal nucleus morphology J:58733
abnormal oculomotor nucleus morphology J:58733
abnormal trigeminal motor nucleus morphology J:58733
Tg(SOD1*G93A)1Gur/0
(B6SJL-Tg(SOD1*G93A)1Gur/J) 		abnormal brainstem morphology J:127265, J:110437
abnormal midbrain morphology J:110437
abnormal oculomotor nucleus morphology J:110437
abnormal red nucleus morphology J:110437
abnormal substantia nigra morphology J:110437
abnormal superior colliculus morphology J:110437
abnormal tegmentum morphology J:110437
Tg(SOD1*G93A)1Gur/0
(involves: C57BL/6 * CD-1 * SJL) 		decreased substantia nigra size J:62381
Tg(SOD1*G93A)2Gur/0
(involves: C57BL/6 * SJL) 		abnormal brainstem morphology J:78629
Tg(Tek-tTA)1Rwng/0
Tg(tetO-Notch4*)1Rwng/0
(involves: FVB/N) 		abnormal midbrain morphology J:139943
Tg(Thy1-Snca)1S13Putt/?
(involves: C57BL/6) 		abnormal brainstem morphology J:177661
Tg(THY1-SNCA*A53T)M53Sud/0
(B6.Cg-Tg(THY1-SNCA*A53T)M53Sud/J) 		abnormal midbrain morphology J:212732
abnormal red nucleus morphology J:212732
abnormal substantia nigra pars compacta morphology J:212732
Tg(UAS-Shh)1Rth/0
Tg(Wnt1-GAL4)1Rth/0
(involves: C57BL/6J * CBA/J) 		abnormal midbrain morphology J:57948
midbrain hyperplasia J:57948
Tgfbr2tm1Karl/Tgfbr2tm1Karl
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * CBA) 		abnormal midbrain morphology J:96359
tip/tip
(B6C3Fe a/a-tip/J) 		abnormal inferior olivary complex morphology J:236593
Tmem67tm1Dgen/Tmem67tm1Dgen
(B6.129P2-Tmem67tm1Dgen) 		abnormal tegmentum morphology J:193837
Tor1atm1Calak/Tor1atm1Calak
(involves: 129 * C57BL/6) 		abnormal pons morphology J:247570
Tor1atm1Wtd/Tor1atm3.1Wtd
Tg(Nes-cre)1Kln/0
(involves: 129S1/Sv * 129S6/SvEvTac * C57BL/6J * SJL) 		abnormal red nucleus morphology J:213785
Tor1atm1Yql/Tor1a+
(involves: 129S2/SvPas * C57BL/6) 		abnormal pontine nuclei morphology J:104513
Tor1atm2Wtd/Tor1atm3.1Wtd
Tg(Nes-cre)1Kln/0
(involves: 129S1/Sv * 129S6/SvEvTac * C57BL/6J * SJL) 		absent red nucleus J:213785
Trappc9em1Xyli/Trappc9em1Xyli
(C57BL/6J-Trappc9em1Xyli) 		abnormal medulla oblongata morphology J:304877
abnormal pons morphology J:304877
Trappc9tm1a(EUCOMM)Wtsi/Trappc9tm1a(EUCOMM)Wtsi
(involves: C57BL/6N) 		decreased substantia nigra size J:294716
Tubb2bbrdp/Tubb2bbrdp
(involves: A/J * FVB) 		decreased midbrain size J:201099
Tulp3tm1Jng/Tulp3+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		abnormal midbrain morphology J:70060
Tulp3tm1Jng/Tulp3tm1Jng
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6J) 		abnormal midbrain morphology J:70060
Ube4btm1Kei/Ube4b+
(involves: C57BL/6) 		abnormal medulla oblongata morphology J:103761
Uchl1gad/Uchl1gad
(involves: CBA/Nga * RFM/Nga) 		abnormal medulla oblongata morphology J:30954
Uchl5Gt(OST447189)Lex/Uchl5Gt(OST447189)Lex
(involves: 129S5/SvEvBrd * C57BL/6J) 		abnormal cerebral aqueduct morphology J:166694
abnormal midbrain morphology J:166694
Ufm1tm1.1Kmts/Ufm1tm1.1Kmts
Tg(Nes-cre)1Kln/0
(involves: C57BL/6 * C57BL/6N * SJL) 		decreased midbrain size J:240522
Ulk4tm1a(KOMP)Wtsi/Ulk4tm1a(KOMP)Wtsi
(involves: C57BL/6N) 		cerebral aqueductal stenosis J:234631
Unc5crcm/Unc5crcm
(B6C3Fe a/a-Unc5crcm/J) 		abnormal inferior colliculus morphology J:40243
Unc5crcm/Unc5crcm
(C57BL/6J-Unc5crcm) 		increased inferior colliculus size J:46670
Unc5crcmTg(Tert)5Hwl/Unc5crcmTg(Tert)5Hwl
(involves: FVB/N) 		abnormal corpora quadrigemina morphology J:85446
Unc5crcmTg(Ucp)1.23Kz/Unc5crcmTg(Ucp)1.23Kz
(involves: C57BL/6J * SJL/J) 		abnormal inferior colliculus morphology J:40243
abnormal pyramidal decussation morphology J:80430
Upf2tm1Btp/Upf2tm1Btp
En1tm2(cre)Wrst/En1+
(involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ) 		decreased inferior colliculus size J:306384
decreased superior colliculus size J:306384
Usp14ax-J/Usp14ax-J
(involves: STOCK Mafbkr) 		abnormal pons morphology J:12283
abnormal pontine nuclei morphology J:12283
decreased midbrain size J:12283
Usp14nmf375/Usp14nmf375
(B6;CByJ-Usp14nmf375/J) 		abnormal brainstem morphology J:87349
Vac14Gt(RRP155)Byg/Vac14Gt(RRP155)Byg
(involves: 129P2/OlaHsd * C57BL/6J) 		abnormal medulla oblongata morphology J:127106
abnormal midbrain morphology J:127106
abnormal pons morphology J:127106
abnormal superior colliculus morphology J:127106
Vangl2Lp/Vangl2Lp
(involves: A) 		abnormal midbrain morphology J:5544, J:133114
Vegfatm1Pec/Vegfatm1Pec
(involves: 129S1/Sv * 129X1/SvJ) 		abnormal facial motor nucleus morphology J:94050
Vps35tm1.1Hlw/Vps35+
(involves: 129S/SvEv * C57BL/6J) 		abnormal substantia nigra pars compacta morphology J:329507
Wasltm1.1Ttha/Wasltm1.1Ttha
Tg(Nes-cre)1Kag/0
(involves: C57BL/6 * SJL) 		abnormal cerebral aqueduct morphology J:207484
cerebral aqueductal stenosis J:207484
Wlstm1.1Lan/Wlstm1.1Lan
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S/SvEv * C57BL/6J * CBA/J * SJL) 		absent midbrain J:164701
Wlstm1.1Whsu/Wlstm1.1Whsu
H2az2Tg(Wnt1-cre)11Rth/H2az2+
(involves: 129S6/SvEvTac * C57BL/6J * CBA/J) 		absent tectum J:167835
absent tegmentum J:167835
Wnt1sw/Wnt1sw
(Not Specified) 		abnormal inferior colliculus morphology J:30722
Wnt1tm1.1Mze/Wnt1tm1.1Mze
En1tm2(cre)Wrst/En1+
(involves: 129S1/Sv * 129X1/SvJ * C57BL/6N) 		abnormal midbrain morphology J:194842
decreased midbrain size J:194842
Wnt1tm1.1Mze/Wnt1tm1.1Mze
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
En1tm2(cre)Wrst/En1+
(involves: 129 * C57BL/6N) 		abnormal midbrain morphology J:194842
Wnt1tm1.1Mze/Wnt1tm1.1Mze
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
Shhtm1(EGFP/cre)Cjt/Shh+
(involves: 129S6/SvEvTac * C57BL/6N) 		abnormal midbrain morphology J:194842
Wnt1tm1.1Mze/Wnt1tm1.1Mze
Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/Gt(ROSA)26Sor+
Tg(Wnt1-cre/ERT)1Alj/0
(involves: 129S6/SvEvTac * C57BL/6N * Swiss Webster) 		abnormal midbrain morphology J:194842
Wnt1tm1Amc/Wnt1tm1Amc
(involves: 129S1/Sv * C57BL/6J) 		absent midbrain J:118582
Wnt1tm1Brd/Wnt1tm1Brd
(involves: 129S7/SvEvBrd * C57BL/6J) 		absent midbrain J:10730
Wnt1tm1Mrc/Wnt1tm1Mrc
(involves: 129S7/SvEvBrd * C57BL/6) 		abnormal midbrain morphology J:67737
Xrcc6tm1Fwa/Xrcc6tm1Fwa
(involves: 129S6/SvEvTac) 		abnormal brainstem morphology J:110848
Zfp423Gt(XB409)Byg/Zfp423Gt(XB409)Byg
(involves: 129P2/OlaHsd * C57BL/6) 		abnormal medulla oblongata morphology J:122606
Zic3tm1Bca/Y
(involves: 129S7/SvEvBrd * C57BL/6) 		abnormal midbrain morphology J:75951
Zic3tm1Bca/Zic3+
(involves: 129S7/SvEvBrd * C57BL/6) 		abnormal midbrain morphology J:75951
Zic3tm1Bca/Zic3tm1Bca
(involves: 129S7/SvEvBrd * C57BL/6) 		abnormal midbrain morphology J:75951
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04/30/2024
MGI 6.23 		The Jackson Laboratory