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MGI Includes
Genes, Genome Features & Maps
54,842
Genes (including uncloned mutants)
47,713
Genes with nucleotide sequence data
24,850
Genes with protein sequence data
17,554
Genes with experimentally-based functional annotations
15,077
Genes with gene traps
14,061
Genes with expression assay results
147,240
Mapped genes/markers
Phenotypes, Alleles & Disease Models
45,987
Mutant alleles in mice
710,432
Mutant alleles in cell lines only
11,391
Genes with mutant alleles in mice
10,444
Genes with mutant alleles in cell lines only
57,745
Total targeted alleles
16,786
Genes with targeted alleles
2,476
Total recombinase transgenes and alleles
55,709
Genotypes with phenotype annotations
1,454
Human diseases with one or more mouse models
4,860
Mouse genotypes modeling human diseases
11,052
Mammalian Phenotype (MP) ontology terms
289,034
MP annotations total
5,131
QTL
Gene Expression
15,407
Genes studied in expression references
14,061
Genes with expression assay results
1,506,474
Expression assay results
284,215
Expression images
72,583
Expression assays
2,344
Mouse mutants with expression data
Recombinase Allele Data
910
Recombinase-containing knock-in alleles
1,566
Recombinase-containing transgenes
2,476
Total recombinase transgenes and alleles
645
Drivers in recombinase transgenes
597
Drivers in recombinase knock-in alleles
3,524
Tissues in recombinase specificity assays
GO Functional Annotations
24,217
Mouse protein-coding genes with GO annotations
11,629
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,093
Mouse genes with 'complete' annotations based on current literature review
309,252
GO annotations total
24,316
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,354
Genes with polymorphisms (RFLP, PCR)
13,012
Markers with polymorphisms (RFLP, PCR)
25,041
Strains
Vertebrate Homology
22,996
Mouse protein coding genes
20,514
Mouse protein coding genes in homology classes
17,097
Mouse protein coding genes in homology classes with Human genes
16,424
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,549
Mouse protein coding genes in homology classes with Rat genes
16,265
Mouse protein coding genes in homology classes with Chimpanzee genes
14,731
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,335
Mouse protein coding genes in homology classes with Dog genes
16,464
Mouse protein coding genes in homology classes with Cattle genes
12,255
Mouse protein coding genes in homology classes with Chicken genes
12,547
Mouse protein coding genes in homology classes with Western clawed frog genes
12,047
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,030,442
Mouse nucleotide sequences
6,901,781
Mouse transcript sequences
345,960
Mouse polypeptide sequences
References
222,397
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
01/26/2016
MGI 6.02
The Jackson Laboratory