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MGI Includes
Genes, Genome Features & Maps
55,731
Genes (including uncloned mutants)
47,116
Genes with nucleotide sequence data
24,211
Genes with protein sequence data
18,415
Genes with experimentally-based functional annotations
14,760
Genes with gene traps
14,382
Genes with expression assay results
150,339
Mapped genes/markers
Phenotypes, Alleles & Disease Models
50,404
Mutant alleles in mice
708,888
Mutant alleles in cell lines only
12,255
Genes with mutant alleles in mice
9,293
Genes with mutant alleles in cell lines only
59,638
Total targeted alleles
16,842
Genes with targeted alleles
2,655
Total recombinase transgenes and alleles
59,939
Genotypes with phenotype annotations
1,525
Human diseases with one or more mouse models
5,155
Mouse genotypes modeling human diseases
11,474
Mammalian Phenotype (MP) ontology terms
308,293
MP annotations total
5,858
QTL
Gene Expression
15,652
Genes studied in expression references
14,382
Genes with expression assay results
1,567,454
Expression assay results
308,072
Expression images
77,906
Expression assays
3,269
Mouse mutants with expression data
Recombinase Allele Data
1,013
Recombinase-containing knock-in alleles
1,640
Recombinase-containing transgenes
2,655
Total recombinase transgenes and alleles
680
Drivers in recombinase transgenes
656
Drivers in recombinase knock-in alleles
3,590
Tissues in recombinase specificity assays
GO Functional Annotations
24,421
Mouse protein-coding genes with GO annotations
11,982
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,073
Mouse genes with 'complete' annotations based on current literature review
303,574
GO annotations total
25,495
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,663,546
RefSNPs
88
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,351
Genes with polymorphisms (RFLP, PCR)
13,010
Markers with polymorphisms (RFLP, PCR)
28,394
Strains
Vertebrate Homology
22,895
Mouse protein coding genes
20,384
Mouse protein coding genes in homology classes
17,090
Mouse protein coding genes in homology classes with Human genes
16,425
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,509
Mouse protein coding genes in homology classes with Rat genes
16,255
Mouse protein coding genes in homology classes with Chimpanzee genes
14,715
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,324
Mouse protein coding genes in homology classes with Dog genes
16,451
Mouse protein coding genes in homology classes with Cattle genes
12,252
Mouse protein coding genes in homology classes with Chicken genes
12,540
Mouse protein coding genes in homology classes with Western clawed frog genes
12,040
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,049,793
Mouse nucleotide sequences
7,085,008
Mouse transcript sequences
367,205
Mouse polypeptide sequences
References
233,173
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/21/2017
MGI 6.07
The Jackson Laboratory