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MGI Includes
Genes, Genome Features & Maps
55,607
Genes (including uncloned mutants)
48,489
Genes with nucleotide sequence data
24,189
Genes with protein sequence data
17,915
Genes with experimentally-based functional annotations
15,042
Genes with gene traps
14,296
Genes with expression assay results
145,729
Mapped genes/markers
Phenotypes, Alleles & Disease Models
49,364
Mutant alleles in mice
709,095
Mutant alleles in cell lines only
12,091
Genes with mutant alleles in mice
9,743
Genes with mutant alleles in cell lines only
59,137
Total targeted alleles
16,836
Genes with targeted alleles
2,582
Total recombinase transgenes and alleles
58,651
Genotypes with phenotype annotations
1,494
Human diseases with one or more mouse models
5,048
Mouse genotypes modeling human diseases
11,434
Mammalian Phenotype (MP) ontology terms
301,449
MP annotations total
5,528
QTL
Gene Expression
15,594
Genes studied in expression references
14,296
Genes with expression assay results
1,551,654
Expression assay results
301,146
Expression images
75,946
Expression assays
3,152
Mouse mutants with expression data
Recombinase Allele Data
960
Recombinase-containing knock-in alleles
1,622
Recombinase-containing transgenes
2,582
Total recombinase transgenes and alleles
670
Drivers in recombinase transgenes
623
Drivers in recombinase knock-in alleles
3,590
Tissues in recombinase specificity assays
GO Functional Annotations
24,200
Mouse protein-coding genes with GO annotations
11,774
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,082
Mouse genes with 'complete' annotations based on current literature review
315,120
GO annotations total
24,255
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,663,546
RefSNPs
88
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,354
Genes with polymorphisms (RFLP, PCR)
13,010
Markers with polymorphisms (RFLP, PCR)
27,448
Strains
Vertebrate Homology
22,890
Mouse protein coding genes
20,424
Mouse protein coding genes in homology classes
17,092
Mouse protein coding genes in homology classes with Human genes
16,426
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,514
Mouse protein coding genes in homology classes with Rat genes
16,257
Mouse protein coding genes in homology classes with Chimpanzee genes
14,716
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,325
Mouse protein coding genes in homology classes with Dog genes
16,453
Mouse protein coding genes in homology classes with Cattle genes
12,252
Mouse protein coding genes in homology classes with Chicken genes
0
Mouse protein coding genes in homology classes with Western clawed frog genes
12,040
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,045,223
Mouse nucleotide sequences
6,965,592
Mouse transcript sequences
364,565
Mouse polypeptide sequences
References
229,469
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory