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MGI Includes
Genes, Genome Features & Maps
42,237
Genes (including uncloned mutants)
34,639
Genes with nucleotide sequence data
24,560
Genes with protein sequence data
16,253
Genes with experimentally-based functional annotations
13,333
Genes with gene traps
13,815
Genes with expression assay results
100,917
Mapped genes/markers
Phenotypes, Alleles & Disease Models
40,241
Mutant alleles in mice
711,673
Mutant alleles in cell lines only
10,320
Genes with mutant alleles in mice
9,713
Genes with mutant alleles in cell lines only
54,278
Total targeted alleles
16,644
Genes with targeted alleles
2,197
Total recombinase transgenes and alleles
52,533
Genotypes with phenotype annotations
1,323
Human diseases with one or more mouse models
4,444
Mouse genotypes modeling human diseases
10,343
Mammalian Phenotype (MP) ontology terms
272,924
MP annotations total
4,859
QTL
Gene Expression
15,153
Genes studied in expression references
13,815
Genes with expression assay results
1,461,802
Expression assay results
263,861
Expression images
67,570
Expression assays
2,008
Mouse mutants with expression data
Recombinase Allele Data
685
Recombinase-containing knock-in alleles
1,512
Recombinase-containing transgenes
2,197
Total recombinase transgenes and alleles
591
Drivers in recombinase transgenes
416
Drivers in recombinase knock-in alleles
3,323
Tissues in recombinase specificity assays
GO Functional Annotations
24,321
Mouse protein-coding genes with GO annotations
11,077
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,061
Mouse genes with 'complete' annotations based on current literature review
291,476
GO annotations total
21,980
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,356
Genes with polymorphisms (RFLP, PCR)
13,014
Markers with polymorphisms (RFLP, PCR)
21,241
Strains
Vertebrate Homology
22,893
Mouse protein coding genes
20,390
Mouse protein coding genes in homology classes
17,055
Mouse protein coding genes in homology classes with Human genes
16,411
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,461
Mouse protein coding genes in homology classes with Rat genes
16,211
Mouse protein coding genes in homology classes with Chimpanzee genes
14,695
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,287
Mouse protein coding genes in homology classes with Dog genes
15,884
Mouse protein coding genes in homology classes with Cattle genes
12,241
Mouse protein coding genes in homology classes with Chicken genes
12,513
Mouse protein coding genes in homology classes with Western clawed frog genes
12,028
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
4,998,983
Mouse nucleotide sequences
6,984,462
Mouse transcript sequences
318,851
Mouse polypeptide sequences
References
206,612
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory