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MGI Includes
Genes, Genome Features & Maps
54,872
Genes (including uncloned mutants)
46,032
Genes with nucleotide sequence data
24,977
Genes with protein sequence data
16,971
Genes with experimentally-based functional annotations
15,100
Genes with gene traps
13,916
Genes with expression assay results
122,173
Mapped genes/markers
Phenotypes, Alleles & Disease Models
43,114
Mutant alleles in mice
710,741
Mutant alleles in cell lines only
10,940
Genes with mutant alleles in mice
10,897
Genes with mutant alleles in cell lines only
55,762
Total targeted alleles
16,715
Genes with targeted alleles
2,389
Total recombinase transgenes and alleles
54,886
Genotypes with phenotype annotations
1,356
Human diseases with one or more mouse models
4,553
Mouse genotypes modeling human diseases
10,907
Mammalian Phenotype (MP) ontology terms
282,002
MP annotations total
4,993
QTL
Gene Expression
15,303
Genes studied in expression references
13,916
Genes with expression assay results
1,479,614
Expression assay results
267,998
Expression images
69,483
Expression assays
2,138
Mouse mutants with expression data
Recombinase Allele Data
854
Recombinase-containing knock-in alleles
1,535
Recombinase-containing transgenes
2,389
Total recombinase transgenes and alleles
603
Drivers in recombinase transgenes
549
Drivers in recombinase knock-in alleles
3,441
Tissues in recombinase specificity assays
GO Functional Annotations
24,179
Mouse protein-coding genes with GO annotations
11,392
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,078
Mouse genes with 'complete' annotations based on current literature review
305,597
GO annotations total
23,268
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,356
Genes with polymorphisms (RFLP, PCR)
13,014
Markers with polymorphisms (RFLP, PCR)
23,508
Strains
Vertebrate Homology
23,277
Mouse protein coding genes
20,547
Mouse protein coding genes in homology classes
17,103
Mouse protein coding genes in homology classes with Human genes
16,426
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,555
Mouse protein coding genes in homology classes with Rat genes
16,271
Mouse protein coding genes in homology classes with Chimpanzee genes
14,733
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,339
Mouse protein coding genes in homology classes with Dog genes
16,469
Mouse protein coding genes in homology classes with Cattle genes
12,258
Mouse protein coding genes in homology classes with Chicken genes
12,547
Mouse protein coding genes in homology classes with Western clawed frog genes
12,049
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,019,250
Mouse nucleotide sequences
7,030,034
Mouse transcript sequences
337,862
Mouse polypeptide sequences
References
214,871
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/12/2015
MGI 5.21
The Jackson Laboratory