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MGI Includes
Genes, Genome Features & Maps
54,855
Genes (including uncloned mutants)
46,026
Genes with nucleotide sequence data
24,979
Genes with protein sequence data
17,074
Genes with experimentally-based functional annotations
15,098
Genes with gene traps
13,982
Genes with expression assay results
122,205
Mapped genes/markers
Phenotypes, Alleles & Disease Models
44,027
Mutant alleles in mice
710,521
Mutant alleles in cell lines only
11,070
Genes with mutant alleles in mice
10,769
Genes with mutant alleles in cell lines only
56,369
Total targeted alleles
16,723
Genes with targeted alleles
2,404
Total recombinase transgenes and alleles
55,153
Genotypes with phenotype annotations
1,374
Human diseases with one or more mouse models
4,631
Mouse genotypes modeling human diseases
10,980
Mammalian Phenotype (MP) ontology terms
283,319
MP annotations total
5,049
QTL
Gene Expression
15,327
Genes studied in expression references
13,982
Genes with expression assay results
1,485,746
Expression assay results
278,315
Expression images
70,389
Expression assays
2,178
Mouse mutants with expression data
Recombinase Allele Data
863
Recombinase-containing knock-in alleles
1,541
Recombinase-containing transgenes
2,404
Total recombinase transgenes and alleles
605
Drivers in recombinase transgenes
554
Drivers in recombinase knock-in alleles
3,463
Tissues in recombinase specificity assays
GO Functional Annotations
24,180
Mouse protein-coding genes with GO annotations
11,438
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,068
Mouse genes with 'complete' annotations based on current literature review
307,459
GO annotations total
23,456
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,356
Genes with polymorphisms (RFLP, PCR)
13,014
Markers with polymorphisms (RFLP, PCR)
23,874
Strains
Vertebrate Homology
23,281
Mouse protein coding genes
20,547
Mouse protein coding genes in homology classes
17,103
Mouse protein coding genes in homology classes with Human genes
16,427
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,554
Mouse protein coding genes in homology classes with Rat genes
16,270
Mouse protein coding genes in homology classes with Chimpanzee genes
14,734
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,338
Mouse protein coding genes in homology classes with Dog genes
16,468
Mouse protein coding genes in homology classes with Cattle genes
12,258
Mouse protein coding genes in homology classes with Chicken genes
12,548
Mouse protein coding genes in homology classes with Western clawed frog genes
12,049
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,019,838
Mouse nucleotide sequences
7,030,376
Mouse transcript sequences
337,922
Mouse polypeptide sequences
References
216,673
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory