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MGI Includes
Genes, Genome Features & Maps
50,911
Genes (including uncloned mutants)
42,093
Genes with nucleotide sequence data
24,763
Genes with protein sequence data
16,950
Genes with experimentally-based functional annotations
14,382
Genes with gene traps
13,891
Genes with expression assay results
107,631
Mapped genes/markers
Phenotypes, Alleles & Disease Models
42,435
Mutant alleles in mice
710,927
Mutant alleles in cell lines only
10,799
Genes with mutant alleles in mice
10,312
Genes with mutant alleles in cell lines only
55,357
Total targeted alleles
16,712
Genes with targeted alleles
2,237
Total recombinase transgenes and alleles
53,866
Genotypes with phenotype annotations
1,346
Human diseases with one or more mouse models
4,511
Mouse genotypes modeling human diseases
10,889
Mammalian Phenotype (MP) ontology terms
279,324
MP annotations total
4,968
QTL
Gene Expression
15,298
Genes studied in expression references
13,891
Genes with expression assay results
1,476,255
Expression assay results
267,686
Expression images
69,108
Expression assays
2,115
Mouse mutants with expression data
Recombinase Allele Data
708
Recombinase-containing knock-in alleles
1,529
Recombinase-containing transgenes
2,237
Total recombinase transgenes and alleles
600
Drivers in recombinase transgenes
428
Drivers in recombinase knock-in alleles
3,435
Tissues in recombinase specificity assays
GO Functional Annotations
24,183
Mouse protein-coding genes with GO annotations
11,348
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,071
Mouse genes with 'complete' annotations based on current literature review
303,876
GO annotations total
23,149
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,356
Genes with polymorphisms (RFLP, PCR)
13,014
Markers with polymorphisms (RFLP, PCR)
22,677
Strains
Vertebrate Homology
23,056
Mouse protein coding genes
20,536
Mouse protein coding genes in homology classes
17,101
Mouse protein coding genes in homology classes with Human genes
16,426
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,548
Mouse protein coding genes in homology classes with Rat genes
16,269
Mouse protein coding genes in homology classes with Chimpanzee genes
14,731
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,338
Mouse protein coding genes in homology classes with Dog genes
16,466
Mouse protein coding genes in homology classes with Cattle genes
12,257
Mouse protein coding genes in homology classes with Chicken genes
12,545
Mouse protein coding genes in homology classes with Western clawed frog genes
12,047
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,019,051
Mouse nucleotide sequences
7,029,912
Mouse transcript sequences
337,763
Mouse polypeptide sequences
References
213,762
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/07/2015
MGI 5.21
The Jackson Laboratory