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MGI Includes
Genes, Genome Features & Maps
50,828
Genes (including uncloned mutants)
42,516
Genes with nucleotide sequence data
24,864
Genes with protein sequence data
16,623
Genes with experimentally-based functional annotations
14,488
Genes with gene traps
13,842
Genes with expression assay results
109,050
Mapped genes/markers
Phenotypes, Alleles & Disease Models
41,512
Mutant alleles in mice
711,201
Mutant alleles in cell lines only
10,636
Genes with mutant alleles in mice
10,590
Genes with mutant alleles in cell lines only
54,910
Total targeted alleles
16,699
Genes with targeted alleles
2,213
Total recombinase transgenes and alleles
53,505
Genotypes with phenotype annotations
1,341
Human diseases with one or more mouse models
4,478
Mouse genotypes modeling human diseases
10,589
Mammalian Phenotype (MP) ontology terms
277,303
MP annotations total
4,920
QTL
Gene Expression
15,270
Genes studied in expression references
13,842
Genes with expression assay results
1,469,943
Expression assay results
266,504
Expression images
68,422
Expression assays
2,043
Mouse mutants with expression data
Recombinase Allele Data
692
Recombinase-containing knock-in alleles
1,521
Recombinase-containing transgenes
2,213
Total recombinase transgenes and alleles
594
Drivers in recombinase transgenes
420
Drivers in recombinase knock-in alleles
3,339
Tissues in recombinase specificity assays
GO Functional Annotations
24,157
Mouse protein-coding genes with GO annotations
11,255
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,062
Mouse genes with 'complete' annotations based on current literature review
295,770
GO annotations total
22,697
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,355
Genes with polymorphisms (RFLP, PCR)
13,014
Markers with polymorphisms (RFLP, PCR)
22,140
Strains
Vertebrate Homology
23,050
Mouse protein coding genes
20,369
Mouse protein coding genes in homology classes
16,934
Mouse protein coding genes in homology classes with Human genes
16,261
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,387
Mouse protein coding genes in homology classes with Rat genes
16,110
Mouse protein coding genes in homology classes with Chimpanzee genes
14,582
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,180
Mouse protein coding genes in homology classes with Dog genes
16,315
Mouse protein coding genes in homology classes with Cattle genes
12,120
Mouse protein coding genes in homology classes with Chicken genes
12,408
Mouse protein coding genes in homology classes with Western clawed frog genes
11,925
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,013,900
Mouse nucleotide sequences
6,993,104
Mouse transcript sequences
372,041
Mouse polypeptide sequences
References
211,356
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
01/20/2015
MGI 5.21
The Jackson Laboratory