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MGI Includes
Genes, Genome Features & Maps
55,351
Genes (including uncloned mutants)
48,267
Genes with nucleotide sequence data
24,433
Genes with protein sequence data
17,712
Genes with experimentally-based functional annotations
15,046
Genes with gene traps
14,098
Genes with expression assay results
147,976
Mapped genes/markers
Phenotypes, Alleles & Disease Models
47,876
Mutant alleles in mice
709,446
Mutant alleles in cell lines only
11,773
Genes with mutant alleles in mice
10,053
Genes with mutant alleles in cell lines only
58,451
Total targeted alleles
16,809
Genes with targeted alleles
2,548
Total recombinase transgenes and alleles
57,812
Genotypes with phenotype annotations
1,470
Human diseases with one or more mouse models
4,927
Mouse genotypes modeling human diseases
11,305
Mammalian Phenotype (MP) ontology terms
296,040
MP annotations total
5,306
QTL
Gene Expression
15,435
Genes studied in expression references
14,098
Genes with expression assay results
1,515,627
Expression assay results
277,372
Expression images
73,704
Expression assays
2,402
Mouse mutants with expression data
Recombinase Allele Data
945
Recombinase-containing knock-in alleles
1,603
Recombinase-containing transgenes
2,548
Total recombinase transgenes and alleles
662
Drivers in recombinase transgenes
615
Drivers in recombinase knock-in alleles
3,579
Tissues in recombinase specificity assays
GO Functional Annotations
24,233
Mouse protein-coding genes with GO annotations
11,743
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,083
Mouse genes with 'complete' annotations based on current literature review
312,158
GO annotations total
24,608
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,663,546
RefSNPs
88
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,354
Genes with polymorphisms (RFLP, PCR)
13,010
Markers with polymorphisms (RFLP, PCR)
26,139
Strains
Vertebrate Homology
22,994
Mouse protein coding genes
20,514
Mouse protein coding genes in homology classes
17,097
Mouse protein coding genes in homology classes with Human genes
16,423
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,546
Mouse protein coding genes in homology classes with Rat genes
16,265
Mouse protein coding genes in homology classes with Chimpanzee genes
14,732
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,333
Mouse protein coding genes in homology classes with Dog genes
16,463
Mouse protein coding genes in homology classes with Cattle genes
12,255
Mouse protein coding genes in homology classes with Chicken genes
12,547
Mouse protein coding genes in homology classes with Western clawed frog genes
12,047
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,035,203
Mouse nucleotide sequences
6,931,675
Mouse transcript sequences
351,196
Mouse polypeptide sequences
References
224,761
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/19/2016
MGI 6.03
The Jackson Laboratory