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MGI Includes
Genes, Genome Features & Maps
55,760
Genes (including uncloned mutants)
48,663
Genes with nucleotide sequence data
24,196
Genes with protein sequence data
18,014
Genes with experimentally-based functional annotations
15,014
Genes with gene traps
14,323
Genes with expression assay results
145,960
Mapped genes/markers
Phenotypes, Alleles & Disease Models
49,853
Mutant alleles in mice
709,001
Mutant alleles in cell lines only
12,155
Genes with mutant alleles in mice
9,653
Genes with mutant alleles in cell lines only
59,380
Total targeted alleles
16,840
Genes with targeted alleles
2,606
Total recombinase transgenes and alleles
59,033
Genotypes with phenotype annotations
1,510
Human diseases with one or more mouse models
5,114
Mouse genotypes modeling human diseases
11,464
Mammalian Phenotype (MP) ontology terms
303,708
MP annotations total
5,614
QTL
Gene Expression
15,606
Genes studied in expression references
14,323
Genes with expression assay results
1,556,595
Expression assay results
302,838
Expression images
76,616
Expression assays
3,210
Mouse mutants with expression data
Recombinase Allele Data
975
Recombinase-containing knock-in alleles
1,631
Recombinase-containing transgenes
2,606
Total recombinase transgenes and alleles
674
Drivers in recombinase transgenes
634
Drivers in recombinase knock-in alleles
3,590
Tissues in recombinase specificity assays
GO Functional Annotations
24,213
Mouse protein-coding genes with GO annotations
11,867
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,076
Mouse genes with 'complete' annotations based on current literature review
300,937
GO annotations total
25,236
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,663,546
RefSNPs
88
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,351
Genes with polymorphisms (RFLP, PCR)
13,010
Markers with polymorphisms (RFLP, PCR)
28,071
Strains
Vertebrate Homology
22,895
Mouse protein coding genes
20,423
Mouse protein coding genes in homology classes
17,091
Mouse protein coding genes in homology classes with Human genes
16,425
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,513
Mouse protein coding genes in homology classes with Rat genes
16,256
Mouse protein coding genes in homology classes with Chimpanzee genes
0
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,324
Mouse protein coding genes in homology classes with Dog genes
16,452
Mouse protein coding genes in homology classes with Cattle genes
12,251
Mouse protein coding genes in homology classes with Chicken genes
0
Mouse protein coding genes in homology classes with Western clawed frog genes
12,039
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,048,294
Mouse nucleotide sequences
7,083,645
Mouse transcript sequences
366,720
Mouse polypeptide sequences
References
231,231
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory