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MGI Includes
Genes, Genome Features & Maps
42,238
Genes (including uncloned mutants)
34,566
Genes with nucleotide sequence data
24,551
Genes with protein sequence data
16,209
Genes with experimentally-based functional annotations
13,307
Genes with gene traps
13,813
Genes with expression assay results
100,910
Mapped genes/markers
Phenotypes, Alleles & Disease Models
39,860
Mutant alleles in mice
711,723
Mutant alleles in cell lines only
10,210
Genes with mutant alleles in mice
9,792
Genes with mutant alleles in cell lines only
54,026
Total targeted alleles
16,626
Genes with targeted alleles
2,183
Total recombinase transgenes and alleles
52,288
Genotypes with phenotype annotations
1,319
Human diseases with one or more mouse models
4,423
Mouse genotypes modeling human diseases
10,313
Mammalian Phenotype (MP) ontology terms
271,616
MP annotations total
4,835
QTL
Gene Expression
15,144
Genes studied in expression references
13,813
Genes with expression assay results
1,469,111
Expression assay results
262,701
Expression images
67,373
Expression assays
1,989
Mouse mutants with expression data
Recombinase Allele Data
681
Recombinase-containing knock-in alleles
1,502
Recombinase-containing transgenes
2,183
Total recombinase transgenes and alleles
589
Drivers in recombinase transgenes
414
Drivers in recombinase knock-in alleles
3,036
Tissues in recombinase specificity assays
GO Functional Annotations
24,275
Mouse protein-coding genes with GO annotations
11,028
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,058
Mouse genes with 'complete' annotations based on current literature review
290,373
GO annotations total
21,869
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,357
Genes with polymorphisms (RFLP, PCR)
13,015
Markers with polymorphisms (RFLP, PCR)
21,031
Strains
Vertebrate Homology
22,889
Mouse protein coding genes
20,388
Mouse protein coding genes in homology classes
17,055
Mouse protein coding genes in homology classes with Human genes
16,411
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,459
Mouse protein coding genes in homology classes with Rat genes
16,211
Mouse protein coding genes in homology classes with Chimpanzee genes
14,695
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,287
Mouse protein coding genes in homology classes with Dog genes
15,884
Mouse protein coding genes in homology classes with Cattle genes
12,241
Mouse protein coding genes in homology classes with Chicken genes
12,028
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
4,994,814
Mouse nucleotide sequences
6,975,765
Mouse transcript sequences
316,646
Mouse polypeptide sequences
References
205,480
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory