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MGI Includes
Genes, Genome Features & Maps
49,899
Genes (including uncloned mutants)
42,697
Genes with nucleotide sequence data
25,111
Genes with protein sequence data
16,488
Genes with experimentally-based functional annotations
14,493
Genes with gene traps
13,834
Genes with expression assay results
109,031
Mapped genes/markers
Phenotypes, Alleles & Disease Models
40,859
Mutant alleles in mice
711,489
Mutant alleles in cell lines only
10,458
Genes with mutant alleles in mice
10,769
Genes with mutant alleles in cell lines only
54,607
Total targeted alleles
16,697
Genes with targeted alleles
2,205
Total recombinase transgenes and alleles
52,953
Genotypes with phenotype annotations
1,334
Human diseases with one or more mouse models
4,480
Mouse genotypes modeling human diseases
10,442
Mammalian Phenotype (MP) ontology terms
275,032
MP annotations total
4,881
QTL
Gene Expression
15,192
Genes studied in expression references
13,834
Genes with expression assay results
1,467,488
Expression assay results
265,970
Expression images
68,248
Expression assays
2,034
Mouse mutants with expression data
Recombinase Allele Data
689
Recombinase-containing knock-in alleles
1,516
Recombinase-containing transgenes
2,205
Total recombinase transgenes and alleles
593
Drivers in recombinase transgenes
420
Drivers in recombinase knock-in alleles
3,335
Tissues in recombinase specificity assays
GO Functional Annotations
24,223
Mouse protein-coding genes with GO annotations
11,195
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,055
Mouse genes with 'complete' annotations based on current literature review
289,045
GO annotations total
22,394
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,355
Genes with polymorphisms (RFLP, PCR)
13,014
Markers with polymorphisms (RFLP, PCR)
21,689
Strains
Vertebrate Homology
23,462
Mouse protein coding genes
20,553
Mouse protein coding genes in homology classes
16,929
Mouse protein coding genes in homology classes with Human genes
16,260
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,382
Mouse protein coding genes in homology classes with Rat genes
16,111
Mouse protein coding genes in homology classes with Chimpanzee genes
14,584
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,180
Mouse protein coding genes in homology classes with Dog genes
16,311
Mouse protein coding genes in homology classes with Cattle genes
12,120
Mouse protein coding genes in homology classes with Chicken genes
12,408
Mouse protein coding genes in homology classes with Western clawed frog genes
11,926
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,008,582
Mouse nucleotide sequences
6,984,997
Mouse transcript sequences
370,365
Mouse polypeptide sequences
References
209,382
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory