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MGI Includes
Genes, Genome Features & Maps
56,658
Genes (including uncloned mutants)
47,575
Genes with nucleotide sequence data
24,319
Genes with protein sequence data
18,594
Genes with experimentally-based functional annotations
14,803
Genes with gene traps
14,496
Genes with expression assay results
151,065
Mapped genes/markers
Phenotypes, Alleles & Disease Models
50,845
Mutant alleles in mice
708,853
Mutant alleles in cell lines only
12,311
Genes with mutant alleles in mice
9,282
Genes with mutant alleles in cell lines only
59,894
Total targeted alleles
16,848
Genes with targeted alleles
2,684
Total recombinase transgenes and alleles
60,470
Genotypes with phenotype annotations
1,534
Human diseases with one or more mouse models
5,225
Mouse genotypes modeling human diseases
11,474
Mammalian Phenotype (MP) ontology terms
312,458
MP annotations total
6,148
QTL
Gene Expression
15,765
Genes studied in expression references
14,496
Genes with expression assay results
1,599,092
Expression assay results
329,137
Expression images
79,252
Expression assays
3,761
Mouse mutants with expression data
Recombinase Allele Data
1,029
Recombinase-containing knock-in alleles
1,650
Recombinase-containing transgenes
2,684
Total recombinase transgenes and alleles
685
Drivers in recombinase transgenes
663
Drivers in recombinase knock-in alleles
3,590
Tissues in recombinase specificity assays
GO Functional Annotations
24,490
Mouse protein-coding genes with GO annotations
12,026
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,069
Mouse genes with 'complete' annotations based on current literature review
308,446
GO annotations total
25,736
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,663,546
RefSNPs
88
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,348
Genes with polymorphisms (RFLP, PCR)
13,010
Markers with polymorphisms (RFLP, PCR)
28,801
Strains
Vertebrate Homology
22,927
Mouse protein coding genes
20,384
Mouse protein coding genes in homology classes
17,089
Mouse protein coding genes in homology classes with Human genes
16,422
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,509
Mouse protein coding genes in homology classes with Rat genes
16,258
Mouse protein coding genes in homology classes with Chimpanzee genes
14,715
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,326
Mouse protein coding genes in homology classes with Dog genes
16,454
Mouse protein coding genes in homology classes with Cattle genes
12,252
Mouse protein coding genes in homology classes with Chicken genes
12,542
Mouse protein coding genes in homology classes with Western clawed frog genes
12,041
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,135,760
Mouse nucleotide sequences
7,085,156
Mouse transcript sequences
367,837
Mouse polypeptide sequences
References
235,245
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/16/2017
MGI 6.09
The Jackson Laboratory