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MGI Includes
Genes, Genome Features & Maps
57,059
Genes (including uncloned mutants)
47,962
Genes with nucleotide sequence data
24,320
Genes with protein sequence data
18,445
Genes with experimentally-based functional annotations
14,770
Genes with gene traps
14,389
Genes with expression assay results
151,427
Mapped genes/markers
Phenotypes, Alleles & Disease Models
50,708
Mutant alleles in mice
708,870
Mutant alleles in cell lines only
12,291
Genes with mutant alleles in mice
9,268
Genes with mutant alleles in cell lines only
59,810
Total targeted alleles
16,845
Genes with targeted alleles
2,672
Total recombinase transgenes and alleles
60,258
Genotypes with phenotype annotations
1,533
Human diseases with one or more mouse models
5,215
Mouse genotypes modeling human diseases
11,474
Mammalian Phenotype (MP) ontology terms
309,988
MP annotations total
6,054
QTL
Gene Expression
15,658
Genes studied in expression references
14,389
Genes with expression assay results
1,574,424
Expression assay results
309,413
Expression images
78,543
Expression assays
3,284
Mouse mutants with expression data
Recombinase Allele Data
1,019
Recombinase-containing knock-in alleles
1,648
Recombinase-containing transgenes
2,672
Total recombinase transgenes and alleles
684
Drivers in recombinase transgenes
656
Drivers in recombinase knock-in alleles
3,590
Tissues in recombinase specificity assays
GO Functional Annotations
24,437
Mouse protein-coding genes with GO annotations
12,011
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,071
Mouse genes with 'complete' annotations based on current literature review
306,062
GO annotations total
25,683
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,663,546
RefSNPs
88
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,348
Genes with polymorphisms (RFLP, PCR)
13,010
Markers with polymorphisms (RFLP, PCR)
28,603
Strains
Vertebrate Homology
22,934
Mouse protein coding genes
20,385
Mouse protein coding genes in homology classes
17,089
Mouse protein coding genes in homology classes with Human genes
16,422
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,510
Mouse protein coding genes in homology classes with Rat genes
16,258
Mouse protein coding genes in homology classes with Chimpanzee genes
14,715
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,326
Mouse protein coding genes in homology classes with Dog genes
16,454
Mouse protein coding genes in homology classes with Cattle genes
12,252
Mouse protein coding genes in homology classes with Chicken genes
12,542
Mouse protein coding genes in homology classes with Western clawed frog genes
12,041
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,050,466
Mouse nucleotide sequences
7,085,139
Mouse transcript sequences
367,826
Mouse polypeptide sequences
References
234,644
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/18/2017
MGI 6.08
The Jackson Laboratory