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MGI Includes
Genes, Genome Features & Maps
54,894
Genes (including uncloned mutants)
46,198
Genes with nucleotide sequence data
25,056
Genes with protein sequence data
17,236
Genes with experimentally-based functional annotations
15,075
Genes with gene traps
13,990
Genes with expression assay results
122,262
Mapped genes/markers
Phenotypes, Alleles & Disease Models
44,472
Mutant alleles in mice
710,410
Mutant alleles in cell lines only
11,143
Genes with mutant alleles in mice
10,677
Genes with mutant alleles in cell lines only
56,504
Total targeted alleles
16,731
Genes with targeted alleles
2,411
Total recombinase transgenes and alleles
55,308
Genotypes with phenotype annotations
1,379
Human diseases with one or more mouse models
4,656
Mouse genotypes modeling human diseases
11,020
Mammalian Phenotype (MP) ontology terms
284,287
MP annotations total
5,050
QTL
Gene Expression
15,332
Genes studied in expression references
13,990
Genes with expression assay results
1,489,424
Expression assay results
279,046
Expression images
70,731
Expression assays
2,195
Mouse mutants with expression data
Recombinase Allele Data
865
Recombinase-containing knock-in alleles
1,546
Recombinase-containing transgenes
2,411
Total recombinase transgenes and alleles
635
Drivers in recombinase transgenes
567
Drivers in recombinase knock-in alleles
3,466
Tissues in recombinase specificity assays
GO Functional Annotations
24,190
Mouse protein-coding genes with GO annotations
11,477
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,073
Mouse genes with 'complete' annotations based on current literature review
308,937
GO annotations total
23,584
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,356
Genes with polymorphisms (RFLP, PCR)
13,013
Markers with polymorphisms (RFLP, PCR)
24,232
Strains
Vertebrate Homology
23,281
Mouse protein coding genes
20,547
Mouse protein coding genes in homology classes
17,103
Mouse protein coding genes in homology classes with Human genes
16,427
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,554
Mouse protein coding genes in homology classes with Rat genes
16,270
Mouse protein coding genes in homology classes with Chimpanzee genes
14,734
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,338
Mouse protein coding genes in homology classes with Dog genes
16,468
Mouse protein coding genes in homology classes with Cattle genes
12,258
Mouse protein coding genes in homology classes with Chicken genes
12,548
Mouse protein coding genes in homology classes with Western clawed frog genes
12,049
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,023,969
Mouse nucleotide sequences
7,035,513
Mouse transcript sequences
341,695
Mouse polypeptide sequences
References
217,851
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory