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MGI Includes
Genes, Genome Features & Maps
42,240
Genes (including uncloned mutants)
34,566
Genes with nucleotide sequence data
24,551
Genes with protein sequence data
16,116
Genes with experimentally-based functional annotations
13,306
Genes with gene traps
13,812
Genes with expression assay results
100,915
Mapped genes/markers
Phenotypes, Alleles & Disease Models
39,675
Mutant alleles in mice
711,740
Mutant alleles in cell lines only
10,170
Genes with mutant alleles in mice
9,826
Genes with mutant alleles in cell lines only
53,896
Total targeted alleles
16,617
Genes with targeted alleles
2,171
Total recombinase transgenes and alleles
52,105
Genotypes with phenotype annotations
1,313
Human diseases with one or more mouse models
4,403
Mouse genotypes modeling human diseases
10,309
Mammalian Phenotype (MP) ontology terms
270,777
MP annotations total
4,835
QTL
Gene Expression
15,133
Genes studied in expression references
13,812
Genes with expression assay results
1,468,105
Expression assay results
262,224
Expression images
67,258
Expression assays
1,979
Mouse mutants with expression data
Recombinase Allele Data
678
Recombinase-containing knock-in alleles
1,493
Recombinase-containing transgenes
2,171
Total recombinase transgenes and alleles
586
Drivers in recombinase transgenes
413
Drivers in recombinase knock-in alleles
3,031
Tissues in recombinase specificity assays
GO Functional Annotations
25,427
Mouse protein-coding genes with GO annotations
10,997
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,055
Mouse genes with 'complete' annotations based on current literature review
291,047
GO annotations total
21,745
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,357
Genes with polymorphisms (RFLP, PCR)
13,015
Markers with polymorphisms (RFLP, PCR)
20,923
Strains
Vertebrate Homology
22,889
Mouse protein coding genes
20,388
Mouse protein coding genes in homology classes
17,055
Mouse protein coding genes in homology classes with Human genes
16,411
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,459
Mouse protein coding genes in homology classes with Rat genes
16,211
Mouse protein coding genes in homology classes with Chimpanzee genes
14,695
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,287
Mouse protein coding genes in homology classes with Dog genes
15,884
Mouse protein coding genes in homology classes with Cattle genes
12,241
Mouse protein coding genes in homology classes with Chicken genes
12,028
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
4,994,312
Mouse nucleotide sequences
6,975,750
Mouse transcript sequences
315,998
Mouse polypeptide sequences
References
204,603
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/01/2014
MGI 5.18
The Jackson Laboratory