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MGI Includes
Genes, Genome Features & Maps
55,347
Genes (including uncloned mutants)
48,285
Genes with nucleotide sequence data
24,182
Genes with protein sequence data
17,851
Genes with experimentally-based functional annotations
15,054
Genes with gene traps
14,290
Genes with expression assay results
145,218
Mapped genes/markers
Phenotypes, Alleles & Disease Models
48,977
Mutant alleles in mice
709,149
Mutant alleles in cell lines only
12,050
Genes with mutant alleles in mice
9,791
Genes with mutant alleles in cell lines only
58,980
Total targeted alleles
16,829
Genes with targeted alleles
2,569
Total recombinase transgenes and alleles
58,290
Genotypes with phenotype annotations
1,485
Human diseases with one or more mouse models
5,008
Mouse genotypes modeling human diseases
11,402
Mammalian Phenotype (MP) ontology terms
299,542
MP annotations total
5,482
QTL
Gene Expression
15,594
Genes studied in expression references
14,290
Genes with expression assay results
1,549,384
Expression assay results
300,130
Expression images
75,677
Expression assays
3,126
Mouse mutants with expression data
Recombinase Allele Data
955
Recombinase-containing knock-in alleles
1,614
Recombinase-containing transgenes
2,569
Total recombinase transgenes and alleles
668
Drivers in recombinase transgenes
622
Drivers in recombinase knock-in alleles
3,586
Tissues in recombinase specificity assays
GO Functional Annotations
24,231
Mouse protein-coding genes with GO annotations
11,822
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,079
Mouse genes with 'complete' annotations based on current literature review
314,467
GO annotations total
24,926
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,663,546
RefSNPs
88
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,354
Genes with polymorphisms (RFLP, PCR)
13,010
Markers with polymorphisms (RFLP, PCR)
27,299
Strains
Vertebrate Homology
22,985
Mouse protein coding genes
20,513
Mouse protein coding genes in homology classes
17,102
Mouse protein coding genes in homology classes with Human genes
16,428
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,547
Mouse protein coding genes in homology classes with Rat genes
16,268
Mouse protein coding genes in homology classes with Chimpanzee genes
14,735
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,339
Mouse protein coding genes in homology classes with Dog genes
16,469
Mouse protein coding genes in homology classes with Cattle genes
12,261
Mouse protein coding genes in homology classes with Chicken genes
12,551
Mouse protein coding genes in homology classes with Western clawed frog genes
12,052
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,045,404
Mouse nucleotide sequences
6,965,407
Mouse transcript sequences
364,571
Mouse polypeptide sequences
References
228,353
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory