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MGI Includes
Genes, Genome Features & Maps
37,314
Genes (including uncloned mutants)
28,996
Genes with nucleotide sequence data
25,074
Genes with protein sequence data
13,956
Genes with experimentally-based functional annotations
13,233
Genes with gene traps
13,172
Genes with expression assay results
85,383
Mapped genes/markers
Phenotypes, Alleles & Disease Models
29,749
Mutant alleles in mice
710,264
Mutant alleles in cell lines only
15,477
Genes with mutant alleles in mice
11,679
Genes with mutant alleles in cell lines only
44,554
Total targeted alleles
15,469
Genes with targeted alleles
1,671
Total recombinase transgenes and alleles
42,223
Genotypes with phenotype annotations
1,124
Human diseases with one or more mouse models
3,586
Mouse genotypes modeling human diseases
8,670
Mammalian Phenotype (MP) ontology terms
222,422
MP annotations total
4,686
QTL
Gene Expression
14,415
Genes studied in expression references
13,172
Genes with expression assay results
1,135,112
Expression assay results
222,989
Expression images
56,981
Expression assays
1,654
Mouse mutants with expression data
Recombinase Allele Data
487
Recombinase-containing knock-in alleles
1,184
Recombinase-containing transgenes
1,671
Total recombinase transgenes and alleles
463
Drivers in recombinase transgenes
302
Drivers in recombinase knock-in alleles
2,721
Tissues in recombinase specificity assays
GO Functional Annotations
25,124
Mouse genes with GO annotations
9,263
Mouse genes with experimentally-derived GO annotations
25,667
Mouse genes with comprehensive GO annotations
238,802
GO annotations total
17,192
Unique references used for GO annotations
988
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
10,089,892
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,037
PCR polymorphism records
3,358
Genes with polymorphisms (RFLP, PCR)
13,020
Markers with polymorphisms (RFLP, PCR)
14,149
Strains
Mammalian Orthology
19,628
Genes with orthology annotations
17,830
Genes with orthologs in Human
16,684
Genes with orthologs in Rat
13,734
Genes with orthologs in Chimp
14,390
Genes with orthologs in Dog
37,314
Genes
Sequences
4,962,566
Mouse nucleotide sequences
6,864,860
Mouse transcript sequences
266,112
Mouse polypeptide sequences
References
174,375
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/08/2012
MGI_4.42
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The Jackson Laboratory