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MGI Includes
Genes, Genome Features & Maps
50,843
Genes (including uncloned mutants)
43,721
Genes with nucleotide sequence data
24,822
Genes with protein sequence data
16,696
Genes with experimentally-based functional annotations
14,534
Genes with gene traps
13,881
Genes with expression assay results
110,514
Mapped genes/markers
Phenotypes, Alleles & Disease Models
41,791
Mutant alleles in mice
711,123
Mutant alleles in cell lines only
10,702
Genes with mutant alleles in mice
10,572
Genes with mutant alleles in cell lines only
55,077
Total targeted alleles
16,704
Genes with targeted alleles
2,220
Total recombinase transgenes and alleles
53,681
Genotypes with phenotype annotations
1,341
Human diseases with one or more mouse models
4,480
Mouse genotypes modeling human diseases
10,678
Mammalian Phenotype (MP) ontology terms
278,215
MP annotations total
4,931
QTL
Gene Expression
15,286
Genes studied in expression references
13,881
Genes with expression assay results
1,473,125
Expression assay results
266,970
Expression images
68,740
Expression assays
2,076
Mouse mutants with expression data
Recombinase Allele Data
697
Recombinase-containing knock-in alleles
1,523
Recombinase-containing transgenes
2,220
Total recombinase transgenes and alleles
596
Drivers in recombinase transgenes
423
Drivers in recombinase knock-in alleles
3,352
Tissues in recombinase specificity assays
GO Functional Annotations
24,164
Mouse protein-coding genes with GO annotations
11,297
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,069
Mouse genes with 'complete' annotations based on current literature review
298,109
GO annotations total
22,939
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,355
Genes with polymorphisms (RFLP, PCR)
13,014
Markers with polymorphisms (RFLP, PCR)
22,345
Strains
Vertebrate Homology
23,062
Mouse protein coding genes
20,398
Mouse protein coding genes in homology classes
16,962
Mouse protein coding genes in homology classes with Human genes
16,289
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,413
Mouse protein coding genes in homology classes with Rat genes
16,136
Mouse protein coding genes in homology classes with Chimpanzee genes
14,609
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,208
Mouse protein coding genes in homology classes with Dog genes
16,341
Mouse protein coding genes in homology classes with Cattle genes
12,143
Mouse protein coding genes in homology classes with Chicken genes
12,431
Mouse protein coding genes in homology classes with Western clawed frog genes
11,945
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,017,243
Mouse nucleotide sequences
7,028,911
Mouse transcript sequences
337,930
Mouse polypeptide sequences
References
212,086
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/17/2015
MGI 5.21
The Jackson Laboratory