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MGI Includes
Genes, Genome Features & Maps
49,605
Genes (including uncloned mutants)
42,509
Genes with nucleotide sequence data
24,856
Genes with protein sequence data
16,597
Genes with experimentally-based functional annotations
14,489
Genes with gene traps
13,833
Genes with expression assay results
109,030
Mapped genes/markers
Phenotypes, Alleles & Disease Models
41,107
Mutant alleles in mice
711,452
Mutant alleles in cell lines only
10,526
Genes with mutant alleles in mice
10,706
Genes with mutant alleles in cell lines only
54,793
Total targeted alleles
16,698
Genes with targeted alleles
2,206
Total recombinase transgenes and alleles
53,074
Genotypes with phenotype annotations
1,340
Human diseases with one or more mouse models
4,474
Mouse genotypes modeling human diseases
10,549
Mammalian Phenotype (MP) ontology terms
275,652
MP annotations total
4,905
QTL
Gene Expression
15,232
Genes studied in expression references
13,833
Genes with expression assay results
1,468,251
Expression assay results
266,254
Expression images
68,296
Expression assays
2,036
Mouse mutants with expression data
Recombinase Allele Data
690
Recombinase-containing knock-in alleles
1,516
Recombinase-containing transgenes
2,206
Total recombinase transgenes and alleles
593
Drivers in recombinase transgenes
420
Drivers in recombinase knock-in alleles
3,340
Tissues in recombinase specificity assays
GO Functional Annotations
24,156
Mouse protein-coding genes with GO annotations
11,212
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,056
Mouse genes with 'complete' annotations based on current literature review
293,984
GO annotations total
22,514
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,355
Genes with polymorphisms (RFLP, PCR)
13,014
Markers with polymorphisms (RFLP, PCR)
21,776
Strains
Vertebrate Homology
23,050
Mouse protein coding genes
20,369
Mouse protein coding genes in homology classes
16,934
Mouse protein coding genes in homology classes with Human genes
16,261
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,387
Mouse protein coding genes in homology classes with Rat genes
16,110
Mouse protein coding genes in homology classes with Chimpanzee genes
14,582
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,180
Mouse protein coding genes in homology classes with Dog genes
16,315
Mouse protein coding genes in homology classes with Cattle genes
12,120
Mouse protein coding genes in homology classes with Chicken genes
12,408
Mouse protein coding genes in homology classes with Western clawed frog genes
11,925
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,013,824
Mouse nucleotide sequences
6,993,049
Mouse transcript sequences
372,041
Mouse polypeptide sequences
References
210,124
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory