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MGI Includes
Genes, Genome Features & Maps
54,870
Genes (including uncloned mutants)
46,031
Genes with nucleotide sequence data
24,981
Genes with protein sequence data
17,026
Genes with experimentally-based functional annotations
15,098
Genes with gene traps
13,967
Genes with expression assay results
122,195
Mapped genes/markers
Phenotypes, Alleles & Disease Models
43,895
Mutant alleles in mice
710,594
Mutant alleles in cell lines only
11,040
Genes with mutant alleles in mice
10,796
Genes with mutant alleles in cell lines only
56,327
Total targeted alleles
16,721
Genes with targeted alleles
2,400
Total recombinase transgenes and alleles
55,039
Genotypes with phenotype annotations
1,361
Human diseases with one or more mouse models
4,594
Mouse genotypes modeling human diseases
10,934
Mammalian Phenotype (MP) ontology terms
282,695
MP annotations total
5,014
QTL
Gene Expression
15,324
Genes studied in expression references
13,967
Genes with expression assay results
1,483,865
Expression assay results
277,627
Expression images
70,172
Expression assays
2,166
Mouse mutants with expression data
Recombinase Allele Data
859
Recombinase-containing knock-in alleles
1,541
Recombinase-containing transgenes
2,400
Total recombinase transgenes and alleles
605
Drivers in recombinase transgenes
553
Drivers in recombinase knock-in alleles
3,458
Tissues in recombinase specificity assays
GO Functional Annotations
24,182
Mouse protein-coding genes with GO annotations
11,419
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,073
Mouse genes with 'complete' annotations based on current literature review
305,967
GO annotations total
23,351
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,908,632
RefSNPs
89
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,356
Genes with polymorphisms (RFLP, PCR)
13,014
Markers with polymorphisms (RFLP, PCR)
23,729
Strains
Vertebrate Homology
23,278
Mouse protein coding genes
20,548
Mouse protein coding genes in homology classes
17,104
Mouse protein coding genes in homology classes with Human genes
16,427
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,556
Mouse protein coding genes in homology classes with Rat genes
16,272
Mouse protein coding genes in homology classes with Chimpanzee genes
14,734
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,340
Mouse protein coding genes in homology classes with Dog genes
16,469
Mouse protein coding genes in homology classes with Cattle genes
12,259
Mouse protein coding genes in homology classes with Chicken genes
12,548
Mouse protein coding genes in homology classes with Western clawed frog genes
12,050
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,019,588
Mouse nucleotide sequences
7,030,314
Mouse transcript sequences
337,895
Mouse polypeptide sequences
References
216,062
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory