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MGI Includes
Genes, Genome Features & Maps
55,755
Genes (including uncloned mutants)
47,084
Genes with nucleotide sequence data
24,213
Genes with protein sequence data
18,187
Genes with experimentally-based functional annotations
14,762
Genes with gene traps
14,344
Genes with expression assay results
150,318
Mapped genes/markers
Phenotypes, Alleles & Disease Models
50,156
Mutant alleles in mice
708,905
Mutant alleles in cell lines only
12,219
Genes with mutant alleles in mice
9,327
Genes with mutant alleles in cell lines only
59,511
Total targeted alleles
16,840
Genes with targeted alleles
2,635
Total recombinase transgenes and alleles
59,796
Genotypes with phenotype annotations
1,520
Human diseases with one or more mouse models
5,141
Mouse genotypes modeling human diseases
11,466
Mammalian Phenotype (MP) ontology terms
307,428
MP annotations total
5,763
QTL
Gene Expression
15,629
Genes studied in expression references
14,344
Genes with expression assay results
1,561,152
Expression assay results
304,381
Expression images
77,285
Expression assays
3,250
Mouse mutants with expression data
Recombinase Allele Data
1,000
Recombinase-containing knock-in alleles
1,635
Recombinase-containing transgenes
2,635
Total recombinase transgenes and alleles
678
Drivers in recombinase transgenes
652
Drivers in recombinase knock-in alleles
3,590
Tissues in recombinase specificity assays
GO Functional Annotations
24,221
Mouse protein-coding genes with GO annotations
11,950
Mouse protein-coding genes with experimentally-derived in mouse GO annotations
26,074
Mouse genes with 'complete' annotations based on current literature review
302,025
GO annotations total
25,333
Unique references used for GO annotations
987
Mouse genes selected for GO Reference Genome Project
Biochemical Pathways
347
Pathways
2,018
Enzymatic reactions
9
Transport reactions
39,629
Polypeptides
6
Protein complexes
3,000
Enzymes
61
Transporters
1,337
Compounds
Strains, SNPs & Polymorphisms
15,663,546
RefSNPs
88
Strains with SNPs
10,649
RFLP records
12,035
PCR polymorphism records
3,351
Genes with polymorphisms (RFLP, PCR)
13,010
Markers with polymorphisms (RFLP, PCR)
28,255
Strains
Vertebrate Homology
22,896
Mouse protein coding genes
20,384
Mouse protein coding genes in homology classes
17,090
Mouse protein coding genes in homology classes with Human genes
16,425
Mouse protein coding genes in homology classes with one-to-one correspondence of Mouse and Human genes
18,509
Mouse protein coding genes in homology classes with Rat genes
16,255
Mouse protein coding genes in homology classes with Chimpanzee genes
14,715
Mouse protein coding genes in homology classes with Rhesus macaque genes
16,324
Mouse protein coding genes in homology classes with Dog genes
16,451
Mouse protein coding genes in homology classes with Cattle genes
12,252
Mouse protein coding genes in homology classes with Chicken genes
12,540
Mouse protein coding genes in homology classes with Western clawed frog genes
12,040
Mouse protein coding genes in homology classes with Zebrafish genes
Sequences
5,048,623
Mouse nucleotide sequences
7,083,736
Mouse transcript sequences
367,112
Mouse polypeptide sequences
References
232,238
References

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
01/17/2017
MGI 6.07
The Jackson Laboratory