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Mammalian Phenotype Ontology Annotations
Query Results - Summary
Symbol
Name
ID
Rara
retinoic acid receptor, alpha
MGI:97856
33 phenotypes from 5 alleles in 5 genetic backgrounds
Export: Excel File
Allelic Composition
Genetic Background
Annotated Term Reference
Raratm1.1Ybe/Raratm1.1Ybe
involves: C57BL/6N
abnormal lymphopoiesis J:207485
Raratm1Ipc/Rara+
involves: 129S2/SvPas
abnormal cricoid cartilage morphology J:42773
Raratm1Ipc/Raratm1Ipc
involves: 129S2/SvPas
abnormal alisphenoid bone morphology J:42773
abnormal cervical axis morphology J:21009
abnormal cervical vertebrae morphology J:21009
abnormal cricoid cartilage morphology J:42773
abnormal hyoid bone morphology J:42773
abnormal incus morphology J:42773
abnormal skeleton morphology J:21009
abnormal spermatogenesis J:13574
abnormal testis morphology J:13574
abnormal thyroid cartilage morphology J:42773
cervical vertebral fusion J:21009
cervical vertebral transformation J:21009
interdigital webbing J:13574
male infertility J:13574
neonatal lethality, incomplete penetrance J:13574
oligozoospermia J:13574
postnatal growth retardation J:13574
premature death J:13574
seminiferous tubule degeneration J:13574
Raratm1Ipc/Raratm1Ipc
involves: 129S2/SvPas * C57BL/6
abnormal male germ cell apoptosis J:98529
abnormal skeleton morphology J:43344
abnormal spermatid morphology J:98529
abnormal spermiogenesis J:98529
abnormal temporal bone squamous part morphology J:43344
abnormal thyroid cartilage morphology J:43344
abnormal tracheal cartilage morphology J:43344
cervical vertebral transformation J:43344
fusion of atlas and odontoid process J:43344
fusion of vertebral arches J:43344
lumbar vertebral transformation J:43344
male infertility J:98529
narrow eye opening J:43344
oligozoospermia J:98529
teratozoospermia J:98529
thoracic vertebral transformation J:43344
vertebral transformation J:43344
Raratm1Rev/Raratm1Rev
involves: 129S4/SvJae
no abnormal phenotype detected J:3997
Raratm2Ipc/Raratm2Ipc
involves: 129S2/SvPas
no abnormal phenotype detected J:13574
Raratm3.1Ipc/Raratm3.1Ipc
involves: 129/Sv * C57BL/6 * SJL
abnormal testis morphology J:75135
male infertility J:75135

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/19/2020
MGI 6.15
The Jackson Laboratory