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Mammalian Phenotype Ontology Annotations
Query Results - Summary
Symbol
Name
ID
Clrn1
clarin 1
MGI:2388124
42 phenotypes from 6 alleles in 6 genetic backgrounds
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Allelic Composition
Genetic Background
Annotated Term Reference
Clrn1tm1.1(KOMP)Vlcg/Clrn1tm1.1(KOMP)Vlcg
C57BL/6N-Clrn1tm1.1(KOMP)Vlcg/Ucd
abnormal auditory brainstem response J:211773
abnormal kidney morphology J:211773
abnormal liver morphology J:211773
abnormal lung morphology J:211773
abnormal skin morphology J:211773
abnormal spleen morphology J:211773
abnormal startle reflex J:211773
abnormal vibrissa morphology J:211773
Clrn1tm1.1Kuna/Clrn1tm1.1Kuna
involves: C57BL/6J
abnormal auditory brainstem response waveform shape J:150215
abnormal cochlear hair cell physiology J:186316
abnormal cochlear hair cell stereociliary bundle morphology J:186316
abnormal inner hair cell stereociliary bundle morphology J:255408
abnormal orientation of outer hair cell stereociliary bundles J:150215
abnormal outer hair cell stereociliary bundle morphology J:150215, J:255408
abnormal vestibular hair cell physiology J:186316
absent cochlear inner hair cells J:150215
absent cochlear outer hair cells J:150215
absent distortion product otoacoustic emissions J:150215
deafness J:150215
decreased cochlear microphonics J:186316
degeneration of organ of Corti supporting cells J:150215
head bobbing J:150215
normal hearing/vestibular/ear phenotype J:150215, J:186316
impaired balance J:150215
impaired hearing J:150215, J:255408
increased or absent threshold for auditory brainstem response J:150215
organ of Corti degeneration J:150215
reduced linear vestibular evoked potential J:150215
normal vision/eye phenotype J:150215
Clrn1tm1.1Kuna/Clrn1tm1.1Kuna
Tg(Atoh1-Clrn1)#Kuna/0
involves: C57BL/6J
abnormal inner hair cell stereociliary bundle morphology J:255408
abnormal outer hair cell stereociliary bundle morphology J:255408
impaired hearing J:255408
Clrn1tm1.1Ugpa/Clrn1tm1.1Ugpa
Myo15atm1.1(cre)Ugds/Myo15a+
involves: 129S1/SvImJ * C57BL/6N
abnormal cochlear IHC afferent innervation pattern J:265318
abnormal cochlear inner hair cell physiology J:265318
abnormal cochlear nerve compound action potential J:265318
abnormal cochlear nerve fiber response J:265318
abnormal cochlear nerve morphology J:265318
abnormal inner hair cell stereociliary bundle morphology J:265318
abnormal outer hair cell stereociliary bundle morphology J:265318
abnormal ribbon synapse morphology J:265318
abnormal synapse morphology J:265318
abnormal synaptic vesicle exocytosis J:265318
cochlear inner hair cell degeneration J:265318
cochlear outer hair cell degeneration J:265318
deafness J:265318
increased or absent distortion product otoacoustic emission threshold J:265318
increased or absent threshold for auditory brainstem response J:265318
sensorineural hearing loss J:265318
Clrn1tm1.2Ugpa/Clrn1tm1.2Ugpa
involves: BALB/c * C57BL/6 * C57BL/6N
abnormal cochlear hair cell stereociliary bundle morphology J:265318
abnormal cochlear IHC afferent innervation pattern J:265318
abnormal cochlear inner hair cell physiology J:265318
abnormal cochlear nerve fiber response J:265318
abnormal cochlear nerve morphology J:265318
abnormal inner hair cell stereociliary bundle morphology J:265318
abnormal outer hair cell stereociliary bundle morphology J:265318
abnormal ribbon synapse morphology J:265318
abnormal synapse morphology J:265318
abnormal synaptic vesicle exocytosis J:265318
absent distortion product otoacoustic emissions J:265318
cochlear ganglion degeneration J:265318
deafness J:265318
increased or absent threshold for auditory brainstem response J:265318
Clrn1tm2.1Kuna/Clrn1tm2.1Kuna
involves: 129 * BALB/cJ * C57BL/6J
abnormal cochlear hair cell stereociliary bundle morphology J:186316
deafness J:186316
increased or absent threshold for auditory brainstem response J:186316
Clrn1tm2.1Kuna/Clrn1tm2.1Kuna
involves: 129 * C57BL/6J
deafness J:260239
Clrn1tm2.1Kuna/Clrn1tm2.1Kuna
Tg(Atoh1-Clrn1)#Kuna/0
involves: 129 * C57BL/6J
deafness J:260239
increased or absent threshold for auditory brainstem response J:260239

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory