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Gm42868 Gene Detail
Summary
  • Symbol
    Gm42868
  • Name
    predicted gene 42868
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5663005
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:100497429-100500125 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5663005
lncRNA gene Chr3:100497429-100500125 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036957
sense intronic lncRNA gene Chr3:101613713-101616409 (+)
A/J MGP_AJ_G0036945
sense intronic lncRNA gene Chr3:98405174-98407870 (+)
AKR/J MGP_AKRJ_G0036892
sense intronic lncRNA gene Chr3:100789242-100791938 (+)
BALB/cJ MGP_BALBcJ_G0036936
sense intronic lncRNA gene Chr3:98169807-98172503 (+)
C3H/HeJ MGP_C3HHeJ_G0036622
sense intronic lncRNA gene Chr3:101114561-101117257 (+)
C57BL/6NJ MGP_C57BL6NJ_G0037448
sense intronic lncRNA gene Chr3:105344956-105347652 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034504
sense intronic lncRNA gene Chr3:94618084-94620766 (+)
CAST/EiJ MGP_CASTEiJ_G0035811
sense intronic lncRNA gene Chr3:100220770-100223469 (+)
CBA/J MGP_CBAJ_G0036597
sense intronic lncRNA gene Chr3:108946164-108948860 (+)
DBA/2J MGP_DBA2J_G0036772
sense intronic lncRNA gene Chr3:97648989-97651709 (+)
FVB/NJ MGP_FVBNJ_G0036722
sense intronic lncRNA gene Chr3:95587350-95590046 (+)
LP/J MGP_LPJ_G0036820
sense intronic lncRNA gene Chr3:102967289-102969985 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036730
sense intronic lncRNA gene Chr3:115204256-115206976 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037566
sense intronic lncRNA gene Chr3:100300873-100303569 (+)
PWK/PhJ MGP_PWKPhJ_G0035504
sense intronic lncRNA gene Chr3:97401917-97404623 (+)
SPRET/EiJ MGP_SPRETEiJ_G0035316
sense intronic lncRNA gene Chr3:98408588-98412802 (+)
WSB/EiJ MGP_WSBEiJ_G0036011
sense intronic lncRNA gene Chr3:100866060-100868756 (+)



Homology
less
Expression
less
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104943 Ensembl Gene Model | MGI Sequence Detail 2697 C57BL/6J ±  kb
transcript ENSMUST00000199168 Ensembl | MGI Sequence Detail 2697 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory