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Gm42805 Pseudogene Detail
Summary
  • Symbol
    Gm42805
  • Name
    predicted gene 42805
  • Feature Type
    pseudogene
  • IDs
    MGI:5662942
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:140439173-140439646 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    3 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5662942
 pseudogene Chr5:140439173-140439646 (-)
129S1/SvImJ MGP_129S1SvImJ_G0013297
 pseudogene Chr5:145527654-145528127 (-)
A/J MGP_AJ_G0013276
 pseudogene Chr5:139335252-139335725 (-)
AKR/J MGP_AKRJ_G0013241
 pseudogene Chr5:143686682-143687155 (-)
BALB/cJ MGP_BALBcJ_G0013255
 pseudogene Chr5:140572740-140573213 (-)
C3H/HeJ MGP_C3HHeJ_G0013105
 pseudogene Chr5:144464403-144464876 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013624
 pseudogene Chr5:150915792-150916265 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011768
 pseudogene Chr5:133177247-133177915 (-)
CAST/EiJ MGP_CASTEiJ_G0012826
 pseudogene Chr5:143890887-143891361 (-)
CBA/J MGP_CBAJ_G0013073
 pseudogene Chr5:157116211-157116684 (-)
DBA/2J MGP_DBA2J_G0013156
 pseudogene Chr5:139144160-139144633 (-)
FVB/NJ MGP_FVBNJ_G0013155
 pseudogene Chr5:138293674-138294147 (-)
LP/J MGP_LPJ_G0013224
 pseudogene Chr5:146139088-146139561 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0013172
 pseudogene Chr5:159702064-159702537 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013626
 pseudogene Chr5:143522286-143522759 (-)
PWK/PhJ MGP_PWKPhJ_G0012639
 pseudogene Chr5:138164644-138165117 (-)
SPRET/EiJ MGP_SPRETEiJ_G0012429
 pseudogene Chr5:141226144-141226618 (-)
WSB/EiJ MGP_WSBEiJ_G0012864
 pseudogene Chr5:144301548-144302021 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105056 Ensembl Gene Model | MGI Sequence Detail 474 C57BL/6J ±  kb
transcript ENSMUST00000196158 Ensembl | MGI Sequence Detail 276 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory