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Catspere2 Gene Detail
Summary
  • Symbol
    Catspere2
  • Name
    catsper channel auxiliary subunit epsilon 2
  • Synonyms
    EG545391, Gm16432, Gm30473
  • Feature Type
    protein coding gene
  • IDs
    MGI:5589632
    NCBI Gene: 545391
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr1:177983423-178172704 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 82.87 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    786 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5589632
protein coding gene Chr1:177982920-178172707 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016852
protein coding gene Chr1:184226365-184291475 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0016787
protein coding gene Chr1:177354585-177607420 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0014958
protein coding gene Chr1:167860869-167920139 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0016692
protein coding gene Chr1:175447437-175737707 (+)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0015981
protein coding gene Chr1:174842336-174885534 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0016256
protein coding gene Chr1:181817012-181868675 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091476 Ensembl Gene Model | MGI Sequence Detail 189282 C57BL/6J ±  kb
transcript ENSMUST00000192146 Ensembl | MGI Sequence Detail 3494 Not Applicable  
polypeptide ENSMUSP00000142187 Ensembl | MGI Sequence Detail 775 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR028751 Cation channel sperm-associated protein subunit delta/epsilon
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
less
MGI:3645414, MGI:3648036
References
more
  • Summaries
    All 21
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory