Gm28514 Gene Detail

Summary

• Symbol
  Gm28514
• Name
  predicted gene 28514

• Feature Type
  lncRNA gene
• IDs
  MGI:5579220
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:35537685-35538995 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  18 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579220	lncRNA gene	Chr7:35537685-35538995 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007149	lincRNA gene	Chr7:35248491-35249801 (+)
A/J	MGP_AJ_G0007145	lincRNA gene	Chr7:34310786-34312097 (+)
AKR/J	MGP_AKRJ_G0007115	lincRNA gene	Chr7:35161100-35162411 (+)
BALB/cJ	MGP_BALBcJ_G0007123	lincRNA gene	Chr7:34602079-34603390 (+)
C3H/HeJ	MGP_C3HHeJ_G0007067	lincRNA gene	Chr7:36036634-36037944 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007288	lincRNA gene	Chr7:37029682-37030992 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006509	lincRNA gene	Chr7:35061700-35063011 (+)
CAST/EiJ	MGP_CASTEiJ_G0006971	lincRNA gene	Chr7:27225839-27227150 (+)
CBA/J	MGP_CBAJ_G0007049	lincRNA gene	Chr7:38135693-38137003 (+)
DBA/2J	MGP_DBA2J_G0007070	lincRNA gene	Chr7:34151348-34152658 (+)
FVB/NJ	MGP_FVBNJ_G0007093	lincRNA gene	Chr7:34085533-34086843 (+)
LP/J	MGP_LPJ_G0007153	lincRNA gene	Chr7:35595073-35596385 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007072	lincRNA gene	Chr7:37129129-37130439 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007293	lincRNA gene	Chr7:34711218-34712530 (+)
PWK/PhJ	MGP_PWKPhJ_G0006913	lincRNA gene	Chr7:27506752-27508064 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006824	lincRNA gene	Chr7:24270796-24272114 (+)
WSB/EiJ	MGP_WSBEiJ_G0007032	lincRNA gene	Chr7:35249846-35251157 (+)

Homology

• Gene Tree
  Gm28514
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000100387 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100387	Ensembl Gene Model | MGI Sequence Detail	1311	C57BL/6J
transcript	ENSMUST00000187488	Ensembl | MGI Sequence Detail	450	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;