Gm27168 Gene Detail

Summary

• Symbol
  Gm27168
• Name
  predicted gene 27168

• Feature Type
  lncRNA gene
• IDs
  MGI:5521011
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:87647105-87647775 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic

Strain
Comparison

• SNPs within 2kb
  30 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5521011	lncRNA gene	Chr8:87647105-87647775 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007350	lincRNA gene	Chr8:87906250-87906920 (-)
A/J	MGP_AJ_G0007347	lincRNA gene	Chr8:84457277-84457947 (-)
AKR/J	MGP_AKRJ_G0007319	lincRNA gene	Chr8:86959370-86960040 (-)
BALB/cJ	MGP_BALBcJ_G0007325	lincRNA gene	Chr8:84622854-84623524 (-)
C3H/HeJ	MGP_C3HHeJ_G0007269	lincRNA gene	Chr8:87572844-87573514 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007496	lincRNA gene	Chr8:91290095-91290765 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006690	lincRNA gene	Chr8:78485922-78486600 (-)
CAST/EiJ	MGP_CASTEiJ_G0007171	lincRNA gene	Chr8:86984154-86984824 (-)
CBA/J	MGP_CBAJ_G0007251	lincRNA gene	Chr8:94367540-94368210 (-)
DBA/2J	MGP_DBA2J_G0007274	lincRNA gene	Chr8:84070400-84071070 (-)
FVB/NJ	MGP_FVBNJ_G0007295	lincRNA gene	Chr8:83024726-83025396 (-)
LP/J	MGP_LPJ_G0007355	lincRNA gene	Chr8:88037215-88037885 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007271	lincRNA gene	Chr8:96883513-96884183 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007498	lincRNA gene	Chr8:86954096-86954766 (-)
PWK/PhJ	MGP_PWKPhJ_G0007113	lincRNA gene	Chr8:83317700-83318370 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007020	lincRNA gene	Chr8:85715254-85715904 (-)
WSB/EiJ	MGP_WSBEiJ_G0007231	lincRNA gene	Chr8:87383124-87383794 (-)

Homology

• Gene Tree
  Gm27168
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000099162 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099162	Ensembl Gene Model | MGI Sequence Detail	671	C57BL/6J
transcript	ENSMUST00000183394	Ensembl | MGI Sequence Detail	361	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;