Gm26473 Gene Detail

Summary

• Symbol
  Gm26473
• Name
  predicted gene, 26473

• Feature Type
  snRNA gene
• IDs
  MGI:5456250
  NCBI Gene: 115486844
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:15968663-15968789 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  44 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5456250	snRNA gene	Chr7:15968663-15968789 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038109	snRNA gene	Chr7:13899600-13899722 (-)
A/J	no annotation
AKR/J	MGP_AKRJ_G0038040	snRNA gene	Chr7:13999033-13999155 (-)
BALB/cJ	MGP_BALBcJ_G0038085	snRNA gene	Chr7:13794568-13794690 (-)
C3H/HeJ	MGP_C3HHeJ_G0037756	snRNA gene	Chr7:14175626-14175748 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038616	snRNA gene	Chr7:14654783-14654909 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035453	snRNA gene	Chr7:15256461-15256586 (-)
CAST/EiJ	MGP_CASTEiJ_G0036907	snRNA gene	Chr7:10947849-10947970 (-)
CBA/J	MGP_CBAJ_G0037730	snRNA gene	Chr7:15114311-15114433 (-)
DBA/2J	MGP_DBA2J_G0037914	snRNA gene	Chr7:13580819-13580941 (-)
FVB/NJ	MGP_FVBNJ_G0037861	snRNA gene	Chr7:13475486-13475612 (-)
LP/J	MGP_LPJ_G0037957	snRNA gene	Chr7:14168885-14169007 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037867	snRNA gene	Chr7:15078870-15078996 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038730	snRNA gene	Chr7:13778639-13778761 (-)
PWK/PhJ	MGP_PWKPhJ_G0036596	snRNA gene	Chr7:11092076-11092202 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036365	snRNA gene	Chr7:8712384-8712509 (-)
WSB/EiJ	MGP_WSBEiJ_G0037127	snRNA gene	Chr7:13820301-13824268 (-)

Homology

• Gene Tree
  Gm26473
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000080413 (Evidence)
• NCBI Gene
  115486844

Representative Sequences			Length	Strain/Species
genomic	115486844	NCBI Gene Model | MGI Sequence Detail	127	C57BL/6J
transcript	XR_004934709	RefSeq | MGI Sequence Detail	127	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26473:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr70708	Chr7:15969324-15969328 (-)	-537 bp