Gm22960 Gene Detail

Summary

• Symbol
  Gm22960
• Name
  predicted gene, 22960

• Feature Type
  snRNA gene
• IDs
  MGI:5452737
  NCBI Gene: 115488256
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:47056067-47056168 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  30 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452737	snRNA gene	Chr13:47056065-47056168 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037433	snRNA gene	Chr13:45697574-45697677 (+)
A/J	MGP_AJ_G0037427	snRNA gene	Chr13:44105933-44106036 (+)
AKR/J	MGP_AKRJ_G0037367	snRNA gene	Chr13:45319783-45319886 (+)
BALB/cJ	MGP_BALBcJ_G0037413	snRNA gene	Chr13:44315189-44315292 (+)
C3H/HeJ	MGP_C3HHeJ_G0037091	snRNA gene	Chr13:45183869-45183972 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037930	snRNA gene	Chr13:47081980-47082083 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034910	snRNA gene	Chr13:42145310-42145413 (+)
CAST/EiJ	MGP_CASTEiJ_G0036265	snRNA gene	Chr13:45125715-45125818 (+)
CBA/J	MGP_CBAJ_G0037064	snRNA gene	Chr13:49046369-49046472 (+)
DBA/2J	MGP_DBA2J_G0037243	snRNA gene	Chr13:43662987-43663090 (+)
FVB/NJ	MGP_FVBNJ_G0037189	snRNA gene	Chr13:43179340-43179443 (+)
LP/J	MGP_LPJ_G0037293	snRNA gene	Chr13:45923839-45923942 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037206	snRNA gene	Chr13:48863128-48863231 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038046	snRNA gene	Chr13:45010875-45010978 (+)
PWK/PhJ	MGP_PWKPhJ_G0035960	snRNA gene	Chr13:43791459-43791562 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035752	snRNA gene	Chr13:43681602-43681705 (+)
WSB/EiJ	MGP_WSBEiJ_G0036476	snRNA gene	Chr13:45327858-45327961 (+)

Homology

• Gene Tree
  Gm22960
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084466 (Evidence)
• NCBI Gene
  115488256

Representative Sequences			Length	Strain/Species
genomic	115488256	NCBI Gene Model | MGI Sequence Detail	102	C57BL/6J
transcript	XR_004938328	RefSeq | MGI Sequence Detail	102	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;