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n-R5s213 Gene Detail
Summary
  • Symbol
    n-R5s213
  • Name
    nuclear encoded rRNA 5S 213
  • Feature Type
    rRNA gene
  • IDs
    MGI:4422078
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr1:82635013-82635110 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 42.37 cM
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4422078
rRNA gene Chr1:82635013-82635110 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036501
rRNA gene Chr1:83549319-83549416 (+)
A/J MGP_AJ_G0036488
rRNA gene Chr1:80589691-80589788 (+)
AKR/J MGP_AKRJ_G0036439
rRNA gene Chr1:82773550-82773647 (+)
BALB/cJ MGP_BALBcJ_G0036478
rRNA gene Chr1:80652340-80652437 (+)
C3H/HeJ MGP_C3HHeJ_G0036170
rRNA gene Chr1:83164427-83164524 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036991
rRNA gene Chr1:86769846-86769943 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0034092
rRNA gene Chr1:75813765-75813862 (+)
CAST/EiJ MGP_CASTEiJ_G0035358
rRNA gene Chr1:82571469-82571566 (+)
CBA/J MGP_CBAJ_G0036143
rRNA gene Chr1:89543446-89543543 (+)
DBA/2J MGP_DBA2J_G0036318
rRNA gene Chr1:79877313-79877410 (+)
FVB/NJ MGP_FVBNJ_G0036273
rRNA gene Chr1:78971748-78971840 (+)
LP/J MGP_LPJ_G0036365
rRNA gene Chr1:84670785-84670882 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036272
rRNA gene Chr1:92957173-92957270 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0037105
rRNA gene Chr1:82952026-82952123 (+)
PWK/PhJ MGP_PWKPhJ_G0035059
rRNA gene Chr1:79312945-79313030 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034874
rRNA gene Chr1:82148226-82148323 (+)
WSB/EiJ MGP_WSBEiJ_G0035559
rRNA gene Chr1:82742012-82742109 (+)



Homology
less
Expression
less
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000065055 Ensembl Gene Model | MGI Sequence Detail 98 C57BL/6J ±  kb
transcript ENSMUST00000083121 Ensembl | MGI Sequence Detail 98 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:156847 Gardner PP, et al., Rfam: updates to the RNA families database. Nucleic Acids Res. 2009 Jan;37(Database issue):D136-40

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/06/2019
MGI 6.14
The Jackson Laboratory