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n-R5s30 Gene Detail
Summary
  • Symbol
    n-R5s30
  • Name
    nuclear encoded rRNA 5S 30
  • Feature Type
    rRNA gene
  • IDs
    MGI:4421875
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr16:5324036-5324157 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 2.52 cM
Strain
Comparison
more
  • SNPs within 2kb
    31 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4421875
rRNA gene Chr16:5324036-5324157 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036599
rRNA gene Chr16:1864448-1864569 (-)
A/J MGP_AJ_G0036587
rRNA gene Chr16:1664236-1664357 (-)
AKR/J MGP_AKRJ_G0036537
rRNA gene Chr16:1860711-1860832 (-)
BALB/cJ MGP_BALBcJ_G0036577
rRNA gene Chr16:1814191-1814312 (-)
C3H/HeJ MGP_C3HHeJ_G0036268
rRNA gene Chr16:1897673-1897794 (-)
C57BL/6NJ MGP_C57BL6NJ_G0037089
rRNA gene Chr16:1946325-1946446 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0034182
rRNA gene Chr16:1606795-1606916 (-)
CAST/EiJ MGP_CASTEiJ_G0035455
rRNA gene Chr16:1896512-1896633 (-)
CBA/J MGP_CBAJ_G0036241
rRNA gene Chr16:2066015-2066136 (-)
DBA/2J MGP_DBA2J_G0036416
rRNA gene Chr16:1759341-1759462 (-)
FVB/NJ MGP_FVBNJ_G0036372
rRNA gene Chr16:1760117-1760238 (-)
LP/J MGP_LPJ_G0036463
rRNA gene Chr16:1856283-1856404 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036369
rRNA gene Chr16:1909423-1909544 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037204
rRNA gene Chr16:1832762-1832883 (-)
PWK/PhJ MGP_PWKPhJ_G0035155
rRNA gene Chr16:1857777-1857898 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034970
rRNA gene Chr16:1916640-1916761 (-)
WSB/EiJ MGP_WSBEiJ_G0035657
rRNA gene Chr16:1870595-1870716 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084573 Ensembl Gene Model | MGI Sequence Detail 122 C57BL/6J ±  kb
transcript ENSMUST00000122624 Ensembl | MGI Sequence Detail 122 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 2
  • Earliest
    J:156847 Gardner PP, et al., Rfam: updates to the RNA families database. Nucleic Acids Res. 2009 Jan;37(Database issue):D136-40

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/07/2020
MGI 6.15
The Jackson Laboratory