Gm8010 Pseudogene Detail

Summary

• Symbol
  Gm8010
• Name
  predicted gene 8010

• Feature Type
  pseudogene
• IDs
  MGI:3648648
  NCBI Gene: 666262
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:177970867-177971838 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 82.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  29 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648648	pseudogene	Chr1:177970724-177972508 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039940	pseudogene	Chr1:184389764-184390736 (+)
A/J	MGP_AJ_G0039948	pseudogene	Chr1:176961583-176962555 (+)
AKR/J	MGP_AKRJ_G0039868	pseudogene	Chr1:182248210-182256092 (+)
BALB/cJ	MGP_BALBcJ_G0039924	pseudogene	Chr1:177603671-177604643 (+)
C3H/HeJ	MGP_C3HHeJ_G0040332	pseudogene	ChrX:134609751-134610584 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0037523	pseudogene	ChrX:125857407-125858450 (-)
CAST/EiJ	MGP_CASTEiJ_G0039375	pseudogene	ChrX:115358712-115359547 (-)
CBA/J	MGP_CBAJ_G0039540	pseudogene	Chr1:197455263-197456234 (+)
DBA/2J	MGP_DBA2J_G0039738	pseudogene	Chr1:175856662-175857664 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0040555	pseudogene	ChrX:135526065-135533263 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0040591	pseudogene	Chr1:181996898-181997870 (+)
PWK/PhJ	MGP_PWKPhJ_G0039022	pseudogene	ChrX:112375302-112376140 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038088	pseudogene	Chr1:180837708-180838670 (-)
WSB/EiJ	MGP_WSBEiJ_G0038900	pseudogene	Chr1:182197856-182198828 (+)

Homology

• Gene Tree
  Gm8010
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm8010
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000102493 (Evidence)
• NCBI Gene
  666262

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102493	Ensembl Gene Model | MGI Sequence Detail	972	C57BL/6J
transcript	ENSMUST00000194128	Ensembl | MGI Sequence Detail	873	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;