About   Help   FAQ
Rhox4f Gene Detail
Summary
  • Symbol
    Rhox4f
  • Name
    reproductive homeobox 4F
  • Synonyms
    Rhox4.6
  • Feature Type
    protein coding gene
  • IDs
    MGI:3613392
    NCBI Gene: 636177
  • Member of
    Rhox4 cluster, Rhox cluster
  • Alliance
Location &
Maps
more
  • Sequence Map
    ChrX:37602895-37607686 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 21.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    3
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3613392
protein coding gene ChrX:37602894-37607704 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0036159
protein coding gene ChrX:32436398-32438190 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0034755
protein coding gene ChrX:32118329-32119676 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 636177 NCBI Gene Model | MGI Sequence Detail 4792 C57BL/6J ±  kb
transcript NM_001039696 RefSeq | MGI Sequence Detail 929 C57BL/6  
polypeptide NP_001034785 RefSeq | MGI Sequence Detail 205 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR001356 Homeobox domain
    IPR009057 Homeobox-like domain superfamily
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
    Developmental Gene Expression 1
    Phenotypes 1
  • Earliest
    J:105023 Morris L, et al., Identification of a tandem duplicated array in the Rhox alpha locus on mouse chromosome X. Mamm Genome. 2006 Feb;17(2):178-187
  • Latest
    J:229199 Song HW, et al., shRNA off-target effects in vivo: impaired endogenous siRNA expression and spermatogenic defects. PLoS One. 2015;10(3):e0118549

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
03/24/2020
MGI 6.15
The Jackson Laboratory