About   Help   FAQ
Lrit3
Gene Detail
Symbol

Name
ID
Lrit3
leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
MGI:2685267
Synonyms
LOC242235
Feature Type
protein coding gene
Genetic Map
Chromosome 3
58.99 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr3:129787881-129804030 bp, - strand
From VEGA annotation of GRCm38

  16150 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:19426  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Lrit3

Human
homologs
Human Homolog LRIT3, leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
NCBI Gene ID 345193
neXtProt AC  NX_Q3SXY7
Human Synonyms  CSNB1F, FIGLER4
Human Chr (Location)  4q25; chr4:109848184-109872315 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human LRIT3
Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF )
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process regulation of fibroblast growth factor receptor signaling pathway
Component cellular_component
Function molecular_function
Expression
Literature Summary: (1 records)
Data Summary: Results (12)    Tissues (12)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 12
cDNA source data(1)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(2) cDNA(1) Primer pair(1)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000045099 (Evidence)
Ensembl Gene ModelENSMUSG00000093865 (Evidence)
Entrez Gene242235 (Evidence)
UniGene302549
DoTSDT.94125679
NIA Mouse Gene IndexU277347
Consensus CDS ProjectCCDS57256.1
International Mouse Knockout Project StatusLrit3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000045099 VEGA Gene Model | MGI Sequence Detail 16150 C57BL/6J ±  kb
transcript OTTMUST00000118505 VEGA | MGI Sequence Detail 2456 Not Applicable 
polypeptide OTTMUSP00000066145 VEGA | MGI Sequence Detail 681 Not Applicable 

For the selected sequences
All sequences(21) RefSeq(5) UniProt(4)
Polymorphisms
SNPs within 2kb(243 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000483 Cysteine-rich flanking region, C-terminal
InterPro IPR003961 Fibronectin, type III
InterPro IPR007110 Immunoglobulin-like domain
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR003598 Immunoglobulin subtype 2
InterPro IPR001611 Leucine-rich repeat
InterPro IPR000372 Leucine-rich repeat-containing N-terminal
InterPro IPR003591 Leucine-rich repeat, typical subtype
References
(Earliest) J:143398 Homma S, et al., Expression pattern of LRR and Ig domain-containing protein (LRRIG protein) in the early mouse embryo. Gene Expr Patterns. 2009 Jan;9(1):1-26
All references(16)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/09/2014
MGI 5.20
The Jackson Laboratory