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BC035947 Gene Detail
Summary
  • Symbol
    BC035947
  • Name
    cDNA sequence BC035947
  • Synonyms
    MGC:37308
  • Feature Type
    protein coding gene
  • IDs
    MGI:2652858
    NCBI Gene: 269211
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr1:78497026-78512158 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 40.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    104 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2652858
protein coding gene Chr1:78497026-78512158 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016199
protein coding gene Chr1:79218618-79241515 (-)
A/J MGP_AJ_G0016182
protein coding gene Chr1:76452769-76459300 (-)
AKR/J MGP_AKRJ_G0016139
protein coding gene Chr1:78509372-78513403 (-)
BALB/cJ MGP_BALBcJ_G0016137
protein coding gene Chr1:76531332-76535466 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0016590
protein coding gene Chr1:82266437-82289054 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0015552
protein coding gene Chr1:78269197-78273932 (-)
CBA/J MGP_CBAJ_G0015941
protein coding gene Chr1:84963849-84967986 (-)
DBA/2J MGP_DBA2J_G0016042
protein coding gene Chr1:75730608-75756263 (-)
FVB/NJ MGP_FVBNJ_G0016045
protein coding gene Chr1:74923273-74940172 (-)
LP/J MGP_LPJ_G0016114
protein coding gene Chr1:80358908-80365221 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016065
protein coding gene Chr1:88210850-88229483 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016637
protein coding gene Chr1:78654882-78659328 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving BC035947
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090486 Ensembl Gene Model | MGI Sequence Detail 15133 C57BL/6J ±  kb
transcript ENSMUST00000170511 Ensembl | MGI Sequence Detail 3063 Not Applicable  
polypeptide ENSMUSP00000132488 Ensembl | MGI Sequence Detail 695 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR008981 F-MuLV receptor-binding
    IPR001584 Integrase, catalytic core
    IPR040643 Murine leukemia virus integrase, C-terminal
    IPR012337 Ribonuclease H-like superfamily
    IPR036397 Ribonuclease H superfamily
    IPR018154 TLV/ENV coat polyprotein
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory