About   Help   FAQ
B9d2
Gene Detail
 Symbol
Name
ID
B9d2
B9 protein domain 2
MGI:2387643
Synonyms MGC:41256, stumpy
Feature Type protein coding gene
Genetic Map
Chromosome 7
13.97 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:25681158-25686558 bp, + strand
From NCBI annotation of GRCm38

  5401 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12733  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Gene Tree: B9d2

Human
homologs
Human Homolog B9D2, B9 protein domain 2
NCBI Gene ID 80776
neXtProt AC  NX_Q9BPU9
Human Synonyms  ICIS-1, MKS10, MKSR2
Human Chr (Location)  19q13.2; chr19:41354417-41364540 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human B9D2
Alleles
and
phenotypes
All alleles(10) : Gene trapped(7) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
 
Mice carrying a targeted mutation of this gene exhibit preweaning lethality, hydrops fetalis, and abnormalities in craniofacial, limb, and eye development.
 
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process cell projection organization, cilium assembly
Component cell projection, centrosome, ...
Function gamma-tubulin binding, protein binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(4)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(4) cDNA(4)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000063439 (Evidence)
Entrez Gene232987 (Evidence)
DoTSDT.101364482, DT.40168306
NIA Mouse Gene IndexU178529
Consensus CDS ProjectCCDS20992.1
International Mouse Knockout Project StatusB9d2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 232987 NCBI Gene Model | MGI Sequence Detail 5401 C57BL/6J ±  kb
transcript NM_172148 RefSeq | MGI Sequence Detail 1058 C57BL/6 
polypeptide Q3UK10 UniProt | EBI | MGI Sequence Detail 175 Not Applicable 

For the selected sequences
All sequences(16) RefSeq(4) UniProt(1)
Polymorphisms SNPs within 2kb(10 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR010796 B9 domain
Protein Ontology PR:000004612 B9 domain-containing protein 2
Graphical View of Protein Domain Structure
References (Earliest) J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
(Latest) J:204761 Edwards JP, et al., Regulation of the expression of GARP/latent TGF-beta1 complexes on mouse T cells and their role in regulatory T cell and Th17 differentiation. J Immunol. 2013 Jun 1;190(11):5506-15
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/15/2014
MGI 5.18
The Jackson Laboratory