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Cdcs1 QTL Detail
Summary
  • Symbol
    Cdcs1
  • Name
    cytokine deficiency colitis susceptibility 1
  • Feature Type
    QTL
  • IDs
    MGI:1927809
    NCBI Gene: 170800
Location &
Maps
more
  • Sequence Map
    Chr3:126834882-126835005 bp
    From MGI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 56.07 cM (cM position of peak correlated region/marker)
  • QTL Archive
    Farmer1 download
  • Mapping Data
    2 experiments
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 2 alleles in 2 genetic backgrounds
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Sequences &
Gene Models
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References
more
  • Summaries
    All 12
    Phenotypes 7
  • Earliest
    J:72978 Farmer MA, et al., A major quantitative trait locus on chromosome 3 controls colitis severity in IL-10-deficient mice. Proc Natl Acad Sci U S A. 2001 Nov 20;98(24):13820-5
  • Latest
    J:267912 Ryzhakov G, et al., Alpha kinase 1 controls intestinal inflammation by suppressing the IL-12/Th1 axis. Nat Commun. 2018 Sep 18;9(1):3797

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/26/2022
MGI 6.22
The Jackson Laboratory