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1700074P13Rik
Gene Detail
Symbol

Name
ID
1700074P13Rik
RIKEN cDNA 1700074P13 gene
MGI:1920731
Feature Type
protein coding gene
Genetic Map
Chromosome 6
18.97 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr6:40920437-40940557 bp, - strand
From VEGA annotation of GRCm38

  20121 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49905  Vertebrate Homology Class
1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog

Protein SuperFamily: trypsin
Gene Tree: 1700074P13Rik

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
1700074P13Rik interacts with 122 markers (Mir7-2, Mir7b, Mir9-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component Golgi apparatus
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(15)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000026900 (Evidence)
Ensembl Gene Model ENSMUSG00000029883 (Evidence)
Entrez Gene 73481 (Evidence)
UniGene 333010
DFCI TC1583909, TC1594171
DoTS DT.101340828, DT.50315516
NIA Mouse Gene Index U027227
Consensus CDS Project CCDS20041.1
International Mouse Phenotyping Consortium Status 1700074P13Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026900 VEGA Gene Model | MGI Sequence Detail 20121 C57BL/6J ±  kb
transcript OTTMUST00000066656 VEGA | MGI Sequence Detail 1542 Not Applicable 
polypeptide OTTMUSP00000033441 VEGA | MGI Sequence Detail 251 Not Applicable 

For the selected sequences
All sequences(48) RefSeq(21) UniProt(2)
Polymorphisms
SNPs within 2kb(98 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001254 Peptidase S1
InterPro IPR001314 Peptidase S1A, chymotrypsin-type
InterPro IPR018114 Peptidase S1, trypsin family, active site
InterPro IPR009003 Trypsin-like cysteine/serine peptidase domain
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(24)
Other
accession IDs
MGI:2141612

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory