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Pigm
Gene Detail
Symbol

Name
ID
Pigm
phosphatidylinositol glycan anchor biosynthesis, class M
MGI:1914806
Synonyms
4933437L05Rik, C920011G20Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 1
79.73 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr1:172376531-172384099 bp, + strand
From NCBI annotation of GRCm38

  7569 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:6274  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Pigm

Human
homologs
Human Homolog PIGM, phosphatidylinositol glycan anchor biosynthesis, class M
NCBI Gene ID 93183
neXtProt AC  NX_Q9H3S5
Human Synonyms  GPI-MT-I
Human Chr (Location)  1q23.2; chr1:160027672-160031993 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human PIGM
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pigm interacts with 453 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(18)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(19) Genomic(1) cDNA(18)
Microarray probesets(7)
Other database
links
Ensembl Gene ModelENSMUSG00000050229 (Evidence)
Entrez Gene67556 (Evidence)
NIA Mouse Gene IndexU042231, U249461
EC2.4.1.-
Consensus CDS ProjectCCDS15513.1
International Mouse Knockout Project StatusPigm
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 67556 NCBI Gene Model | MGI Sequence Detail 7569 C57BL/6J ±  kb
transcript NM_026234 RefSeq | MGI Sequence Detail 7569 C57BL/6 
polypeptide Q8C2R7 UniProt | EBI | MGI Sequence Detail 423 Not Applicable 

For the selected sequences
All sequences(33) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(101 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007704 Mannosyltransferase, DXD
Protein Ontology PR:000012700 GPI mannosyltransferase 1
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(33)
Other
accession IDs
MGI:2138304, MGI:2138532, MGI:2443074

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory