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Pigm
Gene Detail
Symbol

Name
ID
Pigm
phosphatidylinositol glycan anchor biosynthesis, class M
MGI:1914806
Synonyms
4933437L05Rik, C920011G20Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 1
79.73 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr1:172376546-172384099 bp, + strand
From VEGA annotation of GRCm38

  7554 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:6274  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PIGM
Gene Tree: Pigm

Human
homologs
PIGM, phosphatidylinositol glycan anchor biosynthesis, class M
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 93183
neXtProt AC: NX_Q9H3S5

Human Synonyms: GPI-MT-I

Human Chr (Location): 1q23.2; chr1:160027672-160031993 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human PIGM

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pigm interacts with 453 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(18)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase pigm ; ZFIN pigm    NEW 
Molecular
reagents
All nucleic(19) Genomic(1) cDNA(18)
Microarray probesets(7)
Other database
links
VEGA Gene Model OTTMUSG00000050149 (Evidence)
Ensembl Gene Model ENSMUSG00000050229 (Evidence)
Entrez Gene 67556 (Evidence)
NIA Mouse Gene Index U042231, U249461
EC 2.4.1.-
Consensus CDS Project CCDS15513.1
International Mouse Phenotyping Consortium Status Pigm
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000050149 VEGA Gene Model | MGI Sequence Detail 7554 C57BL/6J ±  kb
transcript OTTMUST00000127497 VEGA | MGI Sequence Detail 7554 Not Applicable 
polypeptide OTTMUSP00000068764 VEGA | MGI Sequence Detail 423 Not Applicable 

For the selected sequences
All sequences(36) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(101 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007704 Mannosyltransferase, DXD
Protein Ontology PR:000012700 GPI mannosyltransferase 1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(32)
Other
accession IDs
MGI:2138304, MGI:2138532, MGI:2443074

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory