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4933427E11Rik Gene Detail
Summary
  • Symbol
    4933427E11Rik
  • Name
    RIKEN cDNA 4933427E11 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1914019
    NCBI Gene: 66769
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:74581010-74582223 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 34.26 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    41 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914019
 lncRNA gene Chr15:74581010-74582223 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003291
 antisense lncRNA gene Chr15:74491827-74493039 (+)
A/J MGP_AJ_G0003267
 antisense lncRNA gene Chr15:71832881-71834094 (+)
AKR/J MGP_AKRJ_G0003250
 antisense lncRNA gene Chr15:73673629-73674842 (+)
BALB/cJ MGP_BALBcJ_G0003256
 antisense lncRNA gene Chr15:71840543-71841756 (+)
C3H/HeJ MGP_C3HHeJ_G0003209
 antisense lncRNA gene Chr15:73826678-73827891 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003398
 antisense lncRNA gene Chr15:77305500-77306713 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002921
 antisense lncRNA gene Chr15:68245251-68246482 (+)
CAST/EiJ MGP_CASTEiJ_G0003175
 antisense lncRNA gene Chr15:74647998-74649229 (+)
CBA/J MGP_CBAJ_G0003206
 antisense lncRNA gene Chr15:79841560-79842773 (+)
DBA/2J MGP_DBA2J_G0003211
 antisense lncRNA gene Chr15:71431354-71432567 (+)
FVB/NJ MGP_FVBNJ_G0003230
 antisense lncRNA gene Chr15:70474087-70475300 (+)
LP/J MGP_LPJ_G0003284
 antisense lncRNA gene Chr15:74550947-74552160 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003219
 antisense lncRNA gene Chr15:85157273-85158486 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003400
 antisense lncRNA gene Chr15:74061675-74062888 (+)
PWK/PhJ MGP_PWKPhJ_G0003132
 antisense lncRNA gene Chr15:71537276-71538488 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003078
 antisense lncRNA gene Chr15:73950740-73951946 (+)
WSB/EiJ MGP_WSBEiJ_G0003209
 antisense lncRNA gene Chr15:74071972-74073185 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    23 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    3
  • Radiation induced
    2
  • Genomic Mutations
    5 involving 4933427E11Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    8
Sequences &
Gene Models
less
  • All Sequences
    32
  • RefSeq
    1
  • UniProt
    4
Representative SequencesLengthStrain/SpeciesFlank
genomic 66769 NCBI Gene Model | MGI Sequence Detail 1214 C57BL/6J ±  kb
transcript NR_033197 RefSeq | MGI Sequence Detail 1214 C57BL/6  
polypeptide Q9D3Y4 UniProt | EBI | MGI Sequence Detail 167 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 38
    Diseases 1
    Phenotypes 23
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory