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Cope
Gene Detail
 Symbol
Name
ID
Cope
coatomer protein complex, subunit epsilon
MGI:1891702
Synonyms 1110005D17Rik, Cope1
Feature Type protein coding gene
Genetic Map
Chromosome 8
34.15 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr8:70302518-70312993 bp, + strand
From VEGA annotation of GRCm38

  10476 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:5254  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: oatomer, epsilon subunit
Gene Tree: Cope

Human
homologs
Human Homolog COPE, coatomer protein complex, subunit epsilon
NCBI Gene ID 11316
neXtProt AC  NX_O14579
Human Synonyms  epsilon-COP
Human Chr (Location)  19p13.11; chr19:18899514-18919390 (-)  GRCh38
Alleles
and
phenotypes
All alleles(7) : Gene trapped(6) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process protein transport, retrograde vesicle-mediated transport, Golgi to ER, ...
Component COPI-coated vesicle, cytoplasm, ...
Function structural molecule activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(219)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(219) cDNA(219)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000027332 (Evidence)
Ensembl Gene ModelENSMUSG00000055681 (Evidence)
Entrez Gene59042 (Evidence)
UniGene28668
DFCITC1572154, TC1602956, TC1605431
DoTSDT.101207549, DT.55263831, DT.87048916, DT.87059849, DT.91432287
NIA Mouse Gene IndexU073816
Consensus CDS ProjectCCDS22365.1
International Mouse Knockout Project StatusCope
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027332 VEGA Gene Model | MGI Sequence Detail 10476 C57BL/6J ±  kb
transcript OTTMUST00000067558 VEGA | MGI Sequence Detail 1300 Not Applicable 
polypeptide OTTMUSP00000034019 VEGA | MGI Sequence Detail 308 Not Applicable 

For the selected sequences
All sequences(59) RefSeq(2) UniProt(6)
Polymorphisms SNPs within 2kb(86 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006822 Coatomer, epsilon subunit
InterPro IPR011990 Tetratricopeptide-like helical
Protein Ontology PR:000005736 coatomer subunit epsilon
References (Earliest) J:62630 Chu CC, et al., Expressed genes in interleukin-4 treated B cells identified by cDNA representational difference analysis. Mol Immunol. 1998 Jun;35(8):487-502
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(37)
Other
accession IDs
MGI:1915825

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory