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Hnrnpdl Gene Detail
Summary
  • Symbol
    Hnrnpdl
  • Name
    heterogeneous nuclear ribonucleoprotein D-like
  • Synonyms
    D5Ertd650e, D5Wsu145e, hnRNP-DL, Hnrpdl, JKTBP
  • Feature Type
    protein coding gene
  • IDs
    MGI:1355299
    NCBI Gene: 50926
  • Gene Overview
    MyGene.info: HNRNPDL
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:100033577-100039664 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 48.46 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    40 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1355299
protein coding gene Chr5:100033577-100039941 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029782
protein coding gene Chr5:101484256-101490335 (-)
A/J MGP_AJ_G0029748
protein coding gene Chr5:97709020-97715101 (-)
AKR/J MGP_AKRJ_G0029694
protein coding gene Chr5:100947816-100953926 (-)
BALB/cJ MGP_BALBcJ_G0029758
protein coding gene Chr5:98740316-98746426 (-)
C3H/HeJ MGP_C3HHeJ_G0029481
protein coding gene Chr5:101279046-101285156 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030213
protein coding gene Chr5:105735036-105741123 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027448
protein coding gene Chr5:92972826-92978820 (-)
CAST/EiJ MGP_CASTEiJ_G0028892
protein coding gene Chr5:99922562-99928638 (-)
CBA/J MGP_CBAJ_G0029451
protein coding gene Chr5:109369630-109375740 (-)
DBA/2J MGP_DBA2J_G0029595
protein coding gene Chr5:97904596-97910706 (-)
FVB/NJ MGP_FVBNJ_G0029554
protein coding gene Chr5:96715085-96721195 (-)
LP/J MGP_LPJ_G0029683
protein coding gene Chr5:102091405-102099109 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029583
protein coding gene Chr5:114459518-114465599 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030246
protein coding gene Chr5:100417120-100423200 (-)
PWK/PhJ MGP_PWKPhJ_G0028610
protein coding gene Chr5:96338362-96344444 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028445
protein coding gene Chr5:98091795-98097902 (-)
WSB/EiJ MGP_WSBEiJ_G0028970
protein coding gene Chr5:100734130-100740209 (-)



Homology
more
  • Human Ortholog
    HNRNPDL, heterogeneous nuclear ribonucleoprotein D like
  • Vertebrate Orthologs
    9
  • Human Ortholog
    HNRNPDL, heterogeneous nuclear ribonucleoprotein D like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HNRNP, HNRPDL, JKTBP, JKTBP2, laAUF1, LGMD1G, LGMDD3
  • Links
    NCBI Gene ID: 9987
    neXtProt AC: NX_O14979
    UniProt: O14979

  • Chr Location
    4q21.22; chr4:82422564-82430225 (-)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human HNRNPDL associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    15 phenotype references
  • All Mutations and Alleles
    15
  • Chemically induced (other)
    1
  • Gene trapped
    8
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    4
  • Genomic Mutations
    3 involving Hnrnpdl
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000029328 Ensembl Gene Model | MGI Sequence Detail 6088 C57BL/6J ±  kb
transcript ENSMUST00000128187 Ensembl | MGI Sequence Detail 2752 Not Applicable  
polypeptide ENSMUSP00000121005 Ensembl | MGI Sequence Detail 420 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    4 Sequences
  • InterPro Domains
    IPR034847 hnRNP DL, RNA recognition motif 1
    IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
    IPR035979 RNA-binding domain superfamily
    IPR000504 RNA recognition motif domain
Molecular
Reagents
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  • All nucleic 28
    cDNA 22
    Primer pair 4
    Other 2

    Microarray probesets 10
Other
Accession IDs
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MGD-MRK-35785, MGI:107319, MGI:1277209, MGI:2140725, MGI:2140791
References
more
  • Summaries
    All 51
    Developmental Gene Expression 8
    Gene Ontology 6
    Phenotypes 15
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:256883 Zhou J, et al., Conserved expression of ultra-conserved noncoding RNA in mammalian nervous system. Biochim Biophys Acta. 2017 Dec;1860(12):1159-1168

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory