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Hnrnpdl Gene Detail
Summary
  • Symbol
    Hnrnpdl
  • Name
    heterogeneous nuclear ribonucleoprotein D-like
  • Synonyms
    D5Ertd650e, D5Wsu145e, hnRNP-DL, Hnrpdl, JKTBP
  • Feature Type
    protein coding gene
  • IDs
    MGI:1355299
    NCBI Gene: 50926
  • Gene Overview
    MyGene.info: HNRNPDL
Location & Maps
more
  • Sequence Map
    Chr5:100033577-100039664 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      6088 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 48.46 cM
  • Mapping Data
    4 experiments
Homology
more
  • Human Ortholog
    HNRNPDL, heterogeneous nuclear ribonucleoprotein D like
  • Vertebrate Orthologs
    9
  • Human Ortholog
    HNRNPDL, heterogeneous nuclear ribonucleoprotein D like
    Orthology source: HomoloGene
  • Synonyms
    HNRNP, HNRPDL, JKTBP, JKTBP2, laAUF1, LGMD1G
  • Links
    NCBI Gene ID: 9987
    neXtProt AC: NX_O14979

  • Chr Location
    4q21.22; chr4:82422564-82430225 (-)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human HNRNPDL associations

Human Disease Mouse Models
       Limb-Girdle Muscular Dystrophy, Type 1G; LGMD1G   OMIM: 609115
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    15 phenotype references
  • All Mutations and Alleles
    15
  • Chemically induced (other)
    1
  • Gene trapped
    8
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    4
  • Genomic Mutations
    3 involving Hnrnpdl
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024644 VEGA Gene Model | MGI Sequence Detail 6088 C57BL/6J ±  kb
transcript OTTMUST00000060580 VEGA | MGI Sequence Detail 2752 Not Applicable  
polypeptide OTTMUSP00000029556 VEGA | MGI Sequence Detail 420 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    40 from dbSNP Build 142
Protein
Information
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  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000008676 heterogeneous nuclear ribonucleoprotein D-like
  • InterPro Domains
    IPR012677 Nucleotide-binding alpha-beta plait domain
    IPR000504 RNA recognition motif domain
Molecular
Reagents
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  • All nucleic 26
    cDNA 21
    Primer pair 4
    Other 1

    Microarray probesets 10
Other
Accession IDs
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MGD-MRK-35785, MGI:107319, MGI:1277209, MGI:2140725, MGI:2140791
References
more
  • Summaries
    All 43
    Developmental Gene Expression 7
    Gene Ontology 4
    Phenotypes 15
  • Earliest
    J:50869 Ko MSH, et al., Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Hum Mol Genet. 1998 Nov;7(12):1967-78
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory