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Galnt7 Gene Detail
Summary
  • Symbol
    Galnt7
  • Name
    UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
  • Synonyms
    ppGaNTase-T7
  • Feature Type
    protein coding gene
  • IDs
    MGI:1349449
    NCBI Gene: 108150
Location & Maps
more
  • Sequence Map
    Chr8:57523828-57653032 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      129205 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 29.92 cM, cytoband B3.2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    GALNT7, polypeptide N-acetylgalactosaminyltransferase 7
  • Vertebrate Orthologs
    10
  • Human Ortholog
    GALNT7, polypeptide N-acetylgalactosaminyltransferase 7
    Orthology source: HomoloGene
  • Synonyms
    GalNAcT7, GALNAC-T7
  • Links
    NCBI Gene ID: 51809
    neXtProt AC: NX_Q86SF2

  • Chr Location
    4q31.1; chr4:173168753-173323967 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 9685
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: GALNT7
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    4
  • Targeted
    1
  • Genomic Mutations
    1 involving Galnt7
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031562 VEGA Gene Model | MGI Sequence Detail 129205 C57BL/6J ±  kb
transcript OTTMUST00000078172 VEGA | MGI Sequence Detail 4313 Not Applicable  
polypeptide OTTMUSP00000041540 VEGA | MGI Sequence Detail 657 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    672 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 87
    cDNA 85
    Primer pair 2

    Microarray probesets 7
Other
Accession IDs
less
MGI:2142482
References
more
  • Summaries
    All 34
    Developmental Gene Expression 7
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:57753 Ten Hagen KG, et al., Characterization of a UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase that displays glycopeptide N-acetylgalactosaminyltransferase activity. J Biol Chem. 1999 Sep 24;274(39):27867-74
  • Latest
    J:229124 Guess MG, et al., miR-30 family microRNAs regulate myogenic differentiation and provide negative feedback on the microRNA pathway. PLoS One. 2015;10(2):e0118229

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory