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Hgsnat
Gene Detail
Symbol

Name
ID
Hgsnat
heparan-alpha-glucosaminide N-acetyltransferase
MGI:1196297
Synonyms
9430010M12Rik, D8Ertd354e, Tmem76
Feature Type
protein coding gene
Genetic Map
Chromosome 8
14.22 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr8:25944459-25976744 bp, - strand
From NCBI annotation of GRCm38

  32286 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:15586  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: HGSNAT
Protein SuperFamily: membrane protein
Gene Tree: Hgsnat

Human
homologs
HGSNAT, Heparan-alpha-glucosaminide N-acetyltransferase
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 138050
neXtProt AC: NX_Q68CP4

Human Synonyms: HGNAT, MPS3C, TMEM76

Human Chr (Location): 8p11.1; chr8:43140449-43202827 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human HGSNAT

Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(6) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Hgsnat interacts with 113 markers (Mir7-1, Mir16-1, Mir19a, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (42)    Tissues (28)    Images (13)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 42
cDNA source data(78)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase hgsnat    NEW 
Molecular
reagents
All nucleic(79) cDNA(78) Primer pair(1)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000037260 (Evidence)
Entrez Gene 52120 (Evidence)
UniGene 28326
DFCI TC1776671, TC1575416
DoTS DT.533105
NIA Mouse Gene Index U029674
EC 2.3.1.78
Consensus CDS Project CCDS40309.1
International Mouse Phenotyping Consortium Status Hgsnat
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 52120 NCBI Gene Model | MGI Sequence Detail 32286 C57BL/6J ±  kb
transcript NM_029884 RefSeq | MGI Sequence Detail 2679 C57BL/6 
polypeptide Q3UDW8 UniProt | EBI | MGI Sequence Detail 656 Not Applicable 

For the selected sequences
All sequences(35) RefSeq(3) UniProt(3)
Polymorphisms
SNPs within 2kb(286 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012429 Protein of unknown function DUF1624
Protein Ontology PR:000008537 heparan-alpha-glucosaminide N-acetyltransferase
Graphical View of Protein Domain Structure
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:1924492, MGI:2142772

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory