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Hgsnat
Gene Detail
 Symbol
Name
ID
Hgsnat
heparan-alpha-glucosaminide N-acetyltransferase
MGI:1196297
Synonyms 9430010M12Rik, D8Ertd354e, Tmem76
Feature Type protein coding gene
Genetic Map
Chromosome 8
14.22 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr8:25944459-25976744 bp, - strand
From NCBI annotation of GRCm38

  32286 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:15586  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: membrane protein
Gene Tree: Hgsnat

Human
homologs
Human Homolog HGSNAT, Heparan-alpha-glucosaminide N-acetyltransferase
NCBI Gene ID 138050
neXtProt AC  NX_Q68CP4
Human Synonyms  HGNAT, MPS3C, TMEM76
Human Chr (Location)  8p11.1; chr8:43140449-43202827 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human HGSNAT
Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(6) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Hgsnat interacts with 113 markers (Mir7-1, Mir16-1, Mir19a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process lysosomal transport, protein oligomerization
Component integral component of membrane, lysosomal membrane, ...
Function heparan-alpha-glucosaminide N-acetyltransferase activity, transferase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (42)    Tissues (28)    Images (13)
Theiler Stages: 19, 23, 28
Assay TypeResults
RNA in situ 42
cDNA source data(78)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(79) cDNA(78) Primer pair(1)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000037260 (Evidence)
Entrez Gene52120 (Evidence)
UniGene28326
DFCITC1575416, TC1776671
DoTSDT.533105
NIA Mouse Gene IndexU029674
EC2.3.1.78
Consensus CDS ProjectCCDS40309.1
International Mouse Knockout Project StatusHgsnat
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 52120 NCBI Gene Model | MGI Sequence Detail 32286 C57BL/6J ±  kb
transcript NM_029884 RefSeq | MGI Sequence Detail 2679 C57BL/6 
polypeptide Q3UDW8 UniProt | EBI | MGI Sequence Detail 656 Not Applicable 

For the selected sequences
All sequences(33) RefSeq(3) UniProt(3)
Polymorphisms SNPs within 2kb(286 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012429 Protein of unknown function DUF1624
Protein Ontology PR:000008537 heparan-alpha-glucosaminide N-acetyltransferase
Graphical View of Protein Domain Structure
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(35)
Other
accession IDs
MGI:1924492, MGI:2142772

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory