Lgals6
Gene Detail

Symbol Name ID

Lgals6 lectin, galactose binding, soluble 6 MGI:107535

Synonyms

galectin-6

Feature Type

protein coding gene

Genetic Map

Chromosome 7
Syntenic

Mapping data(5)

Sequence Map

Chr7:28833530-28841699 bp From MGI annotation of GRCm38   8170 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

Protein SuperFamily: galectin

Gene Ontology (GO) classifications

All GO classifications: (1 annotations)

Function

carbohydrate binding

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (6)    Tissues (6)   
Theiler Stages: 28

Assay Type	Results
RT-PCR	6

cDNA source data(4)
External Resources: GEO  

Molecular reagents

All nucleic(22) Genomic(15) cDNA(4) Primer pair(2) Other(1)
Microarray probesets(2)

Other database links

Entrez Gene	16857 (Evidence)
DFCI	TC1594165
DoTS	DT.495791

Sequences

Length	Strain/Species
genomic	AF026798	GenBank | EMBL | DDBJ | MGI Sequence Detail	1618	129/Sv
transcript	NM_010707	RefSeq | MGI Sequence Detail	906	129/Sv
polypeptide	O54891	UniProt | EBI | MGI Sequence Detail	301	Not Applicable

All sequences(13) RefSeq(2) UniProt(2)

Polymorphisms

RFLP(1) : SNPs(0 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR008985	Concanavalin A-like lectin/glucanases superfamily
InterPro	IPR013320	Concanavalin A-like lectin/glucanase, subgroup
InterPro	IPR015533	Galectin-4/6
InterPro	IPR001079	Galectin, carbohydrate recognition domain
Protein Ontology	PR:000010026	galectin-6

Graphical View of Protein Domain Structure

References

(Earliest) J:31899 Colnot C, et al., Galectins in mouse embryogenesis. Biochem Soc Trans. 1996 Feb;24(1):141-6
(Latest) J:133198 Houzelstein D, et al., Lgals6, a 2-million-year-old gene in mice: a case of positive darwinian selection and presence/absence polymorphism. Genetics. 2008 Mar;178(3):1533-45
All references(19)

Other accession IDs

MGD-MRK-36105