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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    15
  • Reference
    J:35462 Jones JM, et al., Close linkage of three neuronal genes on distal mouse chromosome 15. Mamm Genome. 1996 Sep;7(9):696-7
  • ID
    MGI:47563
Genes
GeneAlleleAssay TypeDescription
D15Mit34 PCR amplified length variant
Cntn1 Southern analysis Cntn1 cDNA
D15Mit44 PCR amplified length variant
Slc11a2 PCR amplified length variant SCA3/SCA5
D15Mit42 PCR amplified length variant D654
Prph PCR amplified length variant D654
Cacnb3 Southern analysis mB1.7
Scn8a Southern analysis 6-7
D15Mit16 PCR amplified length variant
D15Mit35 reported elsewhere
CROSS
  • Type
    Backcross, sexes unspecified or combined
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
  • Strain
    (C57BL/6J-Scn8a x CAST/Ei)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    C57BL/6J
  • Allele 1
    b from C57BL/6J
  • Allele 2
    c from CAST/EiJ
CROSS Data
MC #mice D15Mit34 Cntn1 D15Mit44 Slc11a2 D15Mit42 Prph Cacnb3 Scn8a D15Mit16 D15Mit35
82 b b b b b b b b b b
79 c c c c c c c c c c
3 c b b b b b b b b b
1 b c c c c c c c c c
5 c c b b b b b b b b
4 b b c c c c c c c c
1 b b b b b b b c c c
1 b b b b b b b b c c
2 c c c c c c c c b b
1 b b b b b b b b b c
1 c c c c c c c c c b
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
D15Mit34 Cntn1 4 180 2.222 1.099
Cntn1 D15Mit44 9 180 5.000 1.624
D15Mit44 Slc11a2 0 180 0.000 0.000
Slc11a2 D15Mit42 0 180 0.000 0.000
D15Mit42 Prph 0 180 0.000 0.000
Prph Cacnb3 0 180 0.000 0.000
Cacnb3 Scn8a 1 180 0.556 0.554
Scn8a D15Mit16 3 180 1.667 0.954
D15Mit16 D15Mit35 2 180 1.111 0.781

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory