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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    6
  • Reference
    J:28829 Street VA, et al., Molecular genetic analysis of distal mouse chromosome 6 defines gene order and positions of the deafwaddler and opisthotonos mutations. Genomics. 1995 Sep 1;29(1):123-30
  • ID
    MGI:45917
Genes
GeneAlleleAssay TypeDescription
D6Mit102 PCR amplified length variant
D6Mit64 PCR amplified length variant
D6Mit39 PCR amplified length variant
D6Mit149 PCR amplified length variant
D6Mit192 PCR amplified length variant
D6Mit108 PCR amplified length variant
D6Mit107 PCR amplified length variant
D6Mit54 PCR amplified length variant
D6Mit23 PCR amplified length variant
D6Mit10 PCR amplified length variant
D6Mit11 PCR amplified length variant
Atp2b2 visible phenotype
D6Mit55 PCR amplified length variant
D6Mit63 PCR amplified length variant
D6Mit44 PCR amplified length variant
D6Mit12 PCR amplified length variant
Notes
  • Experiment
    No recombinant haplotypes inferred for D6Mit39, D6Mit149, D6Mit192, D6Mit108, D6Mit107, D6Mit54, D6Mit23, D6Mit10, D6Mit55 and D6Mit63.F1 direction known.
CROSS
  • Type
    Backcross, sexes unspecified or combined
  • Female Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    (CAST/Ei +/+ x C3HeB/FeJ-Atp2b2 or Atp2b2/+)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    C3HeB/FeJ
  • Allele 1
    c from CAST/EiJ
  • Allele 2
    b from C3HeB/FeJ
2x2 Data Reported
Marker 1 Marker 2 # Recombinants # Parentals
D6Mit102 D6Mit64 5 93
D6Mit64 D6Mit39 1 378
D6Mit64 D6Mit149 1 378
D6Mit64 D6Mit192 1 378
D6Mit39 D6Mit108 7 372
D6Mit39 D6Mit107 7 372
D6Mit39 D6Mit54 7 372
D6Mit39 D6Mit23 7 372
D6Mit149 D6Mit108 7 372
D6Mit149 D6Mit107 7 372
D6Mit149 D6Mit54 7 372
D6Mit149 D6Mit23 7 372
D6Mit192 D6Mit108 7 372
D6Mit192 D6Mit107 7 372
D6Mit192 D6Mit54 7 372
D6Mit192 D6Mit23 7 372
D6Mit108 D6Mit10 2 377
D6Mit107 D6Mit10 2 377
D6Mit54 D6Mit10 2 377
D6Mit23 D6Mit10 2 377
D6Mit10 D6Mit11 2 377
D6Mit11 Atp2b2 1 378
Atp2b2 D6Mit55 2 377
Atp2b2 D6Mit63 2 377
D6Mit55 D6Mit44 6 373
D6Mit63 D6Mit44 6 373
D6Mit44 D6Mit12 15 283
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
D6Mit102 D6Mit64 5 98 5.102 2.223
D6Mit64 D6Mit39 1 379 0.264 0.264
D6Mit64 D6Mit149 1 379 0.264 0.264
D6Mit64 D6Mit192 1 379 0.264 0.264
D6Mit39 D6Mit108 7 379 1.847 0.692
D6Mit39 D6Mit107 7 379 1.847 0.692
D6Mit39 D6Mit54 7 379 1.847 0.692
D6Mit39 D6Mit23 7 379 1.847 0.692
D6Mit149 D6Mit108 7 379 1.847 0.692
D6Mit149 D6Mit107 7 379 1.847 0.692
D6Mit149 D6Mit54 7 379 1.847 0.692
D6Mit149 D6Mit23 7 379 1.847 0.692
D6Mit192 D6Mit108 7 379 1.847 0.692
D6Mit192 D6Mit107 7 379 1.847 0.692
D6Mit192 D6Mit54 7 379 1.847 0.692
D6Mit192 D6Mit23 7 379 1.847 0.692
D6Mit108 D6Mit10 2 379 0.528 0.372
D6Mit107 D6Mit10 2 379 0.528 0.372
D6Mit54 D6Mit10 2 379 0.528 0.372
D6Mit23 D6Mit10 2 379 0.528 0.372
D6Mit10 D6Mit11 2 379 0.528 0.372
D6Mit11 Atp2b2 1 379 0.264 0.264
Atp2b2 D6Mit55 2 379 0.528 0.372
Atp2b2 D6Mit63 2 379 0.528 0.372
D6Mit55 D6Mit44 6 379 1.583 0.641
D6Mit63 D6Mit44 6 379 1.583 0.641
D6Mit44 D6Mit12 15 298 5.034 1.267

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory