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Mapping Data
  • Experiment
  • Chromosome
  • Reference
    J:2948 Jenkins NA, et al., Assignment of secretogranin I locus to mouse chromosome 2 by in situ hybridization and interspecific backcross analysis. Genomics. 1991 Oct;11(2):479-80
  • ID
GeneAlleleAssay TypeDescription
Il1a reported elsewhere
Prnp reported elsewhere
Chgb Southern analysis Chgb 2.3kb cDNA
Pax1 reported elsewhere
Hck reported elsewhere
  • Reference
    Authors use Scg-1 for Chgb.
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J x M. spretus)F1
  • Male Parent
    <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b>
  • Strain
  • Mapping Panel
  • Allele 1
    b from C57BL/6J
  • Allele 2
    s from M. spretus
MC #mice Il1a Prnp Chgb Pax1 Hck
41 b b b b b
71 s s s s s
0 s b b b b
0 b s s s s
0 s s b b b
1 b b s s s
7 s s s b b
4 b b b s s
4 s s s s b
4 b b b b s
Additional Mice Typed Only for Specific Pairs of Loci
Marker 1 Marker 2 # Recombinants # Parentals
Il1a Prnp 0 10
Chgb Pax1 2 51
Pax1 Hck 2 31
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Il1a Prnp 0 142 0.000 0.000
Prnp Chgb 1 132 0.758 0.755
Chgb Pax1 13 185 7.027 1.879
Pax1 Hck 10 165 6.061 1.858

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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MGI 6.15
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