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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    9
  • Reference
    J:10074 Kingsley DM, et al., A molecular genetic linkage map of mouse chromosome 9 with regional localizations for the Gsta, T3g, Ets-1 and Ldlr loci. Genetics. 1989 Sep;123(1):165-72
  • ID
    MGI:39366
Genes
GeneAlleleAssay TypeDescription
Ldlr Southern analysis pV79-1
Ets1 Southern analysis mEts100a
Thy1 Southern analysis pTM-8
Cd3g Southern analysis pB10.AT3(gamma)-1
Cyp1a2 Southern analysis pP3-450FL
Myo5a Myo5ad Southern analysis pGT104-2
Gsta1 Southern analysis rat cDNA
Trf Southern analysis pMTF-5
Gnai2 Southern analysis pGM1.3
Cck Southern analysis Cck.b5
Notes
  • Reference
    Authors use P450-3 for Cyp1a2.
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J x M. spretus)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    C57BL/6J
  • Mapping Panel
  • Allele 1
    b from C57BL/6J
  • Allele 2
    s from M. spretus
CROSS Data
MC #mice Ldlr Ets1 Thy1 Cd3g Cyp1a2 Myo5a Gsta1 Trf Gnai2 Cck
41 b b b b b b b b b b
27 s s s s s s s s s s
11 b s s s s s s s s s
6 s b b b b b b b b b
6 b b s s s s s s s s
5 s s b b b b b b b b
5 b b b b s s s s s s
1 s s s s b b b b b b
9 s s s s s b b b b b
8 b b b b b s s s s s
0 b b b b b b s s s s
2 s s s s s s b b b b
4 b b b b b b b s s s
8 s s s s s s s b b b
1 b b b b b b b b s s
3 s s s s s s s s b b
3 b b b b b b b b b s
8 s s s s s s s s s b
3 b b s s s s s s s b
1 s s b b b b b b b s
1 b b b b s s s s s b
1 s s s s b b b b b s
1 b b b b b s s s s s
1 s s s s s b b b b s
3 s b b b b b b s s s
1 b b s s s s s s b b
Additional Mice Typed Only for Specific Pairs of Loci
Marker 1 Marker 2 # Recombinants # Parentals
Ldlr Ets1 0 2
Ets1 Thy1 0 3
Thy1 Cd3g 0 13
Cd3g Cyp1a2 0 13
Cyp1a2 Myo5a 1 12
Myo5a Gsta1 0 13
Gsta1 Trf 0 13
Trf Gnai2 1 11
Gnai2 Cck 1 11
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Ldlr Ets1 20 162 12.346 2.585
Ets1 Thy1 16 163 9.816 2.330
Thy1 Cd3g 0 173 0.000 0.000
Cd3g Cyp1a2 8 173 4.624 1.597
Cyp1a2 Myo5a 20 173 11.561 2.431
Myo5a Gsta1 2 173 1.156 0.813
Gsta1 Trf 15 173 8.671 2.139
Trf Gnai2 6 172 3.488 1.399
Gnai2 Cck 19 172 11.047 2.390

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory