Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  6
• Reference
  J:48969 Street VA, et al., Mutations in a plasma membrane Ca2+-ATPase gene cause deafness in deafwaddler mice. Nat Genet. 1998 Aug;19(4):390-4
• ID
  MGI:1320942

Genes

Gene	Allele	Assay Type	Description
Cntn3
D6Mit64
Itpr1
D6Mit108
D6Mit54
D6Mit23
D6Mit107
D6Mit328
D6Mit287
Vhl		PCR amplified length variant	Vhlh-pA, Vhlh-pB
D6Mit11
Atp2b2	Atp2b2^dfw	visible phenotype
Slc6a11
D6Mit55
D6Mit63
Syn2
Rho
D6Mit44

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  (CAST/Ei +/+ x C3HeB/FeJ-Atp2b2)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  C3HeB/FeJ-Atp2b2
• Allele 1
  s from CAST/EiJ
• Allele 2
  c from C3HeB/FeJ

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Cntn3	D6Mit64	1	967
D6Mit64	Itpr1	12	956
Itpr1	D6Mit108	6	962
D6Mit108	D6Mit54	5	963
D6Mit54	D6Mit23	2	966
D6Mit54	D6Mit107	2	966
D6Mit54	D6Mit328	2	966
D6Mit23	Vhl	7	961
D6Mit23	D6Mit11	7	961
D6Mit107	Vhl	7	961
D6Mit107	D6Mit11	7	961
D6Mit328	Vhl	7	961
D6Mit328	D6Mit11	7	961
Vhl	Atp2b2	2	966
D6Mit11	Atp2b2	2	966
Atp2b2	Slc6a11	9	959
Atp2b2	D6Mit55	9	959
Slc6a11	D6Mit63	1	967
D6Mit55	D6Mit63	1	967
D6Mit63	Syn2	3	965
Syn2	D6Mit44	6	962
Syn2	Rho	6	962

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Cntn3	D6Mit64	1	968	0.103	0.103
D6Mit64	Itpr1	12	968	1.240	0.356
Itpr1	D6Mit108	6	968	0.620	0.252
D6Mit54	D6Mit107	2	968	0.207	0.146
D6Mit54	D6Mit328	2	968	0.207	0.146
D6Mit23	Vhl	7	968	0.723	0.272
D6Mit23	D6Mit11	7	968	0.723	0.272
D6Mit107	Vhl	7	968	0.723	0.272
D6Mit107	D6Mit11	7	968	0.723	0.272
D6Mit328	Vhl	7	968	0.723	0.272
D6Mit328	D6Mit11	7	968	0.723	0.272
Vhl	Atp2b2	2	968	0.207	0.146
D6Mit11	Atp2b2	2	968	0.207	0.146
Atp2b2	Slc6a11	9	968	0.930	0.308
Atp2b2	D6Mit55	9	968	0.930	0.308
Slc6a11	D6Mit63	1	968	0.103	0.103
D6Mit55	D6Mit63	1	968	0.103	0.103
D6Mit63	Syn2	3	968	0.310	0.179
Syn2	D6Mit44	6	968	0.620	0.252
Syn2	Rho	6	968	0.620	0.252