SHMT1 Vertebrate HGNC

Vertebrate Homology

Source

Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	SHMT1	HGNC:10850 (HGNC) 6470 (Entrez Gene) 182144 (OMIM) SHMT1 (Alliance of Genome Resources)	Chr17 p11.2	Chr17:18327873-18363550 (-) GRCh38	breast cancer	P34896 (UniProt \| EBI) NM_148918 (RefSeq)
mouse	Shmt1	MGI:98299 (MGI) 20425 (Entrez Gene) Gene Tree Shmt1 (Alliance of Genome Resources)	Chr11 37.84 cM	Chr11:60678933-60702091 (-) GRCm39		20425 (NCBI Gene Model) P50431 (UniProt \| EBI) NM_001425412 (RefSeq)
rat	Shmt1	RGD:1312011 (Rat Genome Database) 287379 (Entrez Gene) Shmt1 (Alliance of Genome Resources)	Chr10 q22			NP_001400080 (RefSeq) NM_001413151 (RefSeq)
zebrafish	shmt1	ZDB-GENE-040426-1558 (Zebrafish Model Organism Database) 394021 (Entrez Gene) shmt1 (Alliance of Genome Resources)	Chr3			NP_957340 (RefSeq) NM_201046 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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