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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RXRA HGNC:10477 (HGNC)
6256 (Entrez Gene)
180245 (OMIM)
RXRA (Alliance of Genome Resources)
Chr9 q34.2 Chr9:134317098-134440585 (+)
GRCh38
pancreatic cancer
P19793 (UniProt | EBI)
NM_001291920 (RefSeq)
mouse Rxra MGI:98214 (MGI)
20181 (Entrez Gene)
Gene Tree
Rxra (Alliance of Genome Resources)
Chr2 19.38 cM Chr2:27566452-27652969 (+)
GRCm39
congenital heart disease
dilated cardiomyopathy
systemic lupus erythematosus
ENSMUSG00000015846 (Ensembl Gene Model)
ENSMUSP00000159198 (Ensembl)
ENSMUST00000238913 (Ensembl)
rat Rxra RGD:3610 (Rat Genome Database)
25271 (Entrez Gene)
Rxra (Alliance of Genome Resources)
Chr3 p12 Q05343 (UniProt | EBI)
NM_012805 (RefSeq)
zebrafish rxraa ZDB-GENE-070314-2 (Zebrafish Model Organism Database)
555578 (Entrez Gene)
rxraa (Alliance of Genome Resources)
Chr21 A2T929 (UniProt | EBI)
NM_001161551 (RefSeq)
rxrab ZDB-GENE-990415-243 (Zebrafish Model Organism Database)
793011 (Entrez Gene)
rxrab (Alliance of Genome Resources)
Chr5 Q90415 (UniProt | EBI)
NM_131153 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory