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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRIM27 HGNC:9975 (HGNC)
5987 (Entrez Gene)
602165 (OMIM)
TRIM27 (Alliance of Genome Resources)
Chr6 p22.1 Chr6:28903002-28923988 (-)
GRCh38
P14373 (UniProt | EBI)
NM_006510 (RefSeq)
mouse Trim27 MGI:97904 (MGI)
19720 (Entrez Gene)
Gene Tree
Trim27 (Alliance of Genome Resources)
Chr13 7.67 cM Chr13:21363615-21378894 (+)
GRCm39
ENSMUSG00000021326 (Ensembl Gene Model)
ENSMUSP00000021761 (Ensembl)
ENSMUST00000021761 (Ensembl)
rat Trim27 RGD:1310105 (Rat Genome Database)
291171 (Entrez Gene)
Trim27 (Alliance of Genome Resources)
Chr17 q11 NP_001128446 (RefSeq)
NM_001134974 (RefSeq)
zebrafish btr04 ZDB-GENE-060825-109 (Zebrafish Model Organism Database)
565512 (Entrez Gene)
btr04 (Alliance of Genome Resources)
Chr7 XP_017212468 (RefSeq)
NM_001077168 (RefSeq)
btr20 ZDB-GENE-060421-3419 (Zebrafish Model Organism Database)
678596 (Entrez Gene)
btr20 (Alliance of Genome Resources)
Chr19 NP_001410635 (RefSeq)
NM_001423706 (RefSeq)
btr21 ZDB-GENE-081031-80 (Zebrafish Model Organism Database)
100330973 (Entrez Gene)
btr21 (Alliance of Genome Resources)
Chr19
btr25 ZDB-GENE-070705-377 (Zebrafish Model Organism Database)
571141 (Entrez Gene)
btr25 (Alliance of Genome Resources)
Chr19 NP_001373741 (RefSeq)
NM_001386812 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory