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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CCN1 HGNC:2654 (HGNC)
3491 (Entrez Gene)
602369 (OMIM)
CYR61 (MyGene.info)
CCN1 (Alliance of Genome Resources)
Chr1 p22.3 Chr1:85580761-85583967 (+)
GRCh38.p7
O00622 (UniProt | EBI)
NM_001554 (RefSeq)
mouse Ccn1 MGI:88613 (MGI)
16007 (Entrez Gene)
Gene Tree
Ccn1 (Alliance of Genome Resources)
Chr3 70.18 cM Chr3:145352731-145355736 (-)
GRCm39
atrial heart septal defect 1
atrioventricular septal defect
ENSMUSG00000028195 (Ensembl Gene Model)
ENSMUSP00000029846 (Ensembl)
ENSMUST00000029846 (Ensembl)
rat Ccn1 RGD:620763 (Rat Genome Database)
83476 (Entrez Gene)
Ccn1 (Alliance of Genome Resources)
Chr2 q44 Q9ES72 (UniProt | EBI)
NM_031327 (RefSeq)
zebrafish ccn1 ZDB-GENE-040426-3 (Zebrafish Model Organism Database)
403033 (Entrez Gene)
ccn1 (Alliance of Genome Resources)
Chr23 NP_001001826 (RefSeq)
NM_001001826 (RefSeq)
ccn1l2 ZDB-GENE-060404-5 (Zebrafish Model Organism Database)
553273 (Entrez Gene)
ccn1l2 (Alliance of Genome Resources)
Chr8 NP_001074456 (RefSeq)
NM_001080987 (RefSeq)
si:ch211-106h11.3 ZDB-GENE-050208-296 (Zebrafish Model Organism Database)
497580 (Entrez Gene)
si:ch211-106h11.3 (Alliance of Genome Resources)
Chr3 XP_688534 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory