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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SSH2 HGNC:30580 (HGNC)
85464 (Entrez Gene)
606779 (OMIM)
SSH2 (Alliance of Genome Resources)
Chr17 q11.2 Chr17:29625938-29930276 (-)
GRCh38
Q76I76 (UniProt | EBI)
NM_001282131 (RefSeq)
mouse Ssh2 MGI:2679255 (MGI)
237860 (Entrez Gene)
Gene Tree
Ssh2 (Alliance of Genome Resources)
Chr11 46.36 cM Chr11:77107113-77351046 (+)
GRCm39
ENSMUSG00000037926 (Ensembl Gene Model)
ENSMUSP00000137933 (Ensembl)
ENSMUST00000181283 (Ensembl)
rat Ssh2 RGD:1309389 (Rat Genome Database)
303342 (Entrez Gene)
Ssh2 (Alliance of Genome Resources)
Chr10 q24 NP_001100494 (RefSeq)
NM_001107024 (RefSeq)
zebrafish ssh2a ZDB-GENE-030131-3810 (Zebrafish Model Organism Database)
325085 (Entrez Gene)
ssh2a (Alliance of Genome Resources)
Chr15 XP_021322116 (RefSeq)
ssh2b ZDB-GENE-081205-4 (Zebrafish Model Organism Database)
557912 (Entrez Gene)
ssh2b (Alliance of Genome Resources)
Chr21 NP_001128575 (RefSeq)
NM_001135103 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory