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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
113300

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HTRA2 HGNC:14348 (HGNC)
27429 (Entrez Gene)
606441 (OMIM)
Chr2 p12 Chr2:74529405-74533556 (+)
GRCh38
Parkinson Disease 13, Autosomal Dominant, Susceptibility To; PARK13
O43464 (UniProt | EBI)
NM_013247 (RefSeq)
mouse Htra2 MGI:1928676 (MGI)
64704 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 35.94 cM Chr6:83051266-83055273 (-)
GRCm38
Parkinson Disease 13, Autosomal Dominant, Susceptibility To; PARK13
OTTMUSG00000022486 (VEGA)
OTTMUSP00000025609 (VEGA)
OTTMUST00000053814 (VEGA)
rat Htra2 297376 (Entrez Gene)
Chr4 q34 NP_001100069 (RefSeq)
NM_001106599 (RefSeq)
chimpanzee HTRA2 459339 (Entrez Gene)
Chr2A NP_001267074 (RefSeq)
NM_001280145 (RefSeq)
rhesus macaque HTRA2 709938 (Entrez Gene)
Chr13 NP_001245067 (RefSeq)
NM_001258138 (RefSeq)
cattle HTRA2 523039 (Entrez Gene)
Chr11 A0JNK3 (UniProt | EBI)
NM_001077956 (RefSeq)
dog HTRA2 475782 (Entrez Gene)
Chr17 NP_001271389 (RefSeq)
NM_001284460 (RefSeq)
chicken HTRA2 395990 (Entrez Gene)
Chr4 XP_423666 (RefSeq)
zebrafish LOC560917 560917 (Entrez Gene)
Chr10 XP_009303809 (RefSeq)
LOC793110 793110 (Entrez Gene)
Chr10 XP_009303805 (RefSeq)
LOC793521 793521 (Entrez Gene)
Chr10 XP_001333305 (RefSeq)
LOC797799 797799 (Entrez Gene)
Chr13 NP_001103998 (RefSeq)
NM_001110528 (RefSeq)
LOC797876 797876 (Entrez Gene)
Chr13 XP_009305402 (RefSeq)
LOC799006 799006 (Entrez Gene)
Chr13 XP_009305413 (RefSeq)
LOC799537 799537 (Entrez Gene)
Chr13 NP_001103640 (RefSeq)
NM_001110170 (RefSeq)
LOC100003308 100003308 (Entrez Gene)
Chr13 NP_001103205 (RefSeq)
NM_001109735 (RefSeq)
LOC100149563 100149563 (Entrez Gene)
Chr13 NP_001122292 (RefSeq)
NM_001128820 (RefSeq)
LOC100329860 100329860 (Entrez Gene)
Chr13 XP_002664149 (RefSeq)
LOC100331049 100331049 (Entrez Gene)
Chr21 XP_002665901 (RefSeq)
si:busm1-sl7.7 100034638 (Entrez Gene)
Chr13 XP_009305398 (RefSeq)
si:dkey-19p15.4 100536969 (Entrez Gene)
Chr13 XP_003199752 (RefSeq)
si:dkey-33c12.2 560031 (Entrez Gene)
Chr10 XP_009303789 (RefSeq)
si:dkey-33c12.10 799791 (Entrez Gene)
Chr13 XP_009305411 (RefSeq)
si:dkey-84o3.2 100330919 (Entrez Gene)
Chr21 XP_005161042 (RefSeq)
si:dkey-84o3.3 100149280 (Entrez Gene)
Chr21 XP_002665896 (RefSeq)
si:dkey-84o3.7 799634 (Entrez Gene)
Chr21 XP_001335201 (RefSeq)
zgc:173425 100003428 (Entrez Gene)
Chr13 NP_001098612 (RefSeq)
NM_001105142 (RefSeq)
zgc:174193 100137109 (Entrez Gene)
Chr10 NP_001108178 (RefSeq)
NM_001114706 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/23/2014
MGI 5.20
The Jackson Laboratory