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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
393

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human STK11 HGNC:11389 (HGNC)
6794 (Entrez Gene)
602216 (OMIM)
Chr19 p13.3 Chr19:1205799-1228435 (+)
GRCh38
Pancreatic Cancer
Peutz-Jeghers Syndrome; PJS
Testicular Germ Cell Tumor; TGCT
Q15831 (UniProt | EBI)
NM_000455 (RefSeq)
mouse Stk11 MGI:1341870 (MGI)
20869 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 39.72 cM Chr10:80115803-80130682 (+)
GRCm38
Endometrial Cancer
Peutz-Jeghers Syndrome; PJS
OTTMUSG00000000002 (VEGA)
OTTMUSP00000020599 (VEGA)
OTTMUST00000045747 (VEGA)
rat Stk11 314621 (Entrez Gene)
Chr7 q11 D4AE59 (UniProt | EBI)
NM_001108069 (RefSeq)
chimpanzee STK11 468641 (Entrez Gene)
Chr19 XP_524028 (RefSeq)
rhesus macaque STK11 705686 (Entrez Gene)
Chr19 NP_001248599 (RefSeq)
NM_001261670 (RefSeq)
dog STK11 485088 (Entrez Gene)
Chr20 XP_542206 (RefSeq)
chicken STK11 420105 (Entrez Gene)
Chr28 Q0GGW5 (UniProt | EBI)
NM_001045833 (RefSeq)
western clawed frog stk11 549287 (Entrez Gene)
ChrUN NP_001016533 (RefSeq)
NM_001016533 (RefSeq)
zebrafish stk11 550537 (Entrez Gene)
Chr2 NP_001017839 (RefSeq)
NM_001017839 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory