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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AGXT HGNC:341 (HGNC)
189 (Entrez Gene)
604285 (OMIM)
AGXT (Alliance of Genome Resources)
Chr2 q37.3 Chr2:240868824-240880502 (+)
GRCh38
primary hyperoxaluria type 1
P21549 (UniProt | EBI)
NM_000030 (RefSeq)
mouse Agxt MGI:1329033 (MGI)
11611 (Entrez Gene)
Gene Tree
Agxt (Alliance of Genome Resources)
Chr1 47.0 cM Chr1:93062962-93073143 (+)
GRCm39
primary hyperoxaluria type 1
11611 (NCBI Gene Model)
O35423 (UniProt | EBI)
NM_001276710 (RefSeq)
rat Agxt RGD:2073 (Rat Genome Database)
24792 (Entrez Gene)
Agxt (Alliance of Genome Resources)
Chr9 q36 P09139 (UniProt | EBI)
NM_030656 (RefSeq)
zebrafish agxta ZDB-GENE-040718-16 (Zebrafish Model Organism Database)
436603 (Entrez Gene)
agxta (Alliance of Genome Resources)
Chr6 NP_001002331 (RefSeq)
NM_001002331 (RefSeq)
agxtb ZDB-GENE-010302-3 (Zebrafish Model Organism Database)
79378 (Entrez Gene)
agxtb (Alliance of Genome Resources)
Chr2 NP_998327 (RefSeq)
NM_213162 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory